Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-binding SAP

Term: IPR003034  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene69197 SustainPine v3.0 256
AutoFact: Putative poly [ADP-ribose] polymerase 3 n=1 Tax=Medicago truncatula RepID=PARP3_MEDTR 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 3 1.791e-17
C-terminus
sp_v3.0_unigene69563 SustainPine v3.0 181
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 5.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene75883 SustainPine v3.0 469
AutoFact: Poly-(ADP-ribose) polymerase I n=1 Tax=Aplysia californica RepID=C8CCN1_APLCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 1 3.448e-12
Putative C-terminus
sp_v3.0_unigene94945 SustainPine v3.0 492
AutoFact: RecName: Full=Putative poly [ADP-ribose] polymerase 3; Short=PARP-3; AltName: Full=NAD(+) ADP-ribosyltransferase 3; Short=ADPRT-3; AltName: Full=Poly[ADP-ribose] synthase 3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 3 3.214e-17
Internal
sp_v3.0_unigene96967 SustainPine v3.0 457
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 1 5.889e-13
N-terminus
sp_v3.0_unigene99569 SustainPine v3.0 1007
AutoFact: E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] ref|NP_001119465.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97324.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97328.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 0.0
Internal
sp_v3.0_unigene100976 SustainPine v3.0 407
AutoFact: SAP domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4KAQ2_ARATH 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene101026 SustainPine v3.0 375
AutoFact: Ku70 homolog [Populus nigra] 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene102944 SustainPine v3.0 288
AutoFact: putative DNA binding domain containing protein [Oryza sativa Japonica Group] gb|AAP54158.1| SAP domain containing protein, expressed [Oryza sativa Japonica Group] 8.0e-26
FL-Next: tr=Pentatricopeptide repeat-containing protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative C-terminus
sp_v3.0_unigene102996 SustainPine v3.0 438
AutoFact: LETM1 domain containing protein 5.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Leucine zipper-ef-hand containing transmembrane protein, putative 4.556e-09
Internal
sp_v3.0_unigene105296 SustainPine v3.0 251
AutoFact: Poly [ADP-ribose] polymerase 2 n=2 Tax=Arabidopsis RepID=PARP2_ARATH 4.0e-12
FL-Next: sp=Poly [ADP-ribose] polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene109176 SustainPine v3.0 187
AutoFact: poly(ADP-ribose) polymerase [Zea mays] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 1 4.83e-13
Internal
sp_v3.0_unigene113621 SustainPine v3.0 261
AutoFact: E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] ref|NP_001119465.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97324.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97328.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] 1.0e-10
FL-Next: sp=E3 SUMO-protein ligase SIZ1; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene123887 SustainPine v3.0 537
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene127403 SustainPine v3.0 753
AutoFact: exocyst complex subunit 6 [Dictyostelium discoideum AX4] sp|Q54B27.1|EXOC6_DICDI RecName: Full=Exocyst complex component 6; AltName: Full=Exocyst complex component Sec15 gb|EAL60467.1| exocyst complex subunit 6 [Dictyostelium discoideum AX4] 2.0e-05
FL-Next: sp=Probable exocyst complex component 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Sec15, putative 2.495e-09
C-terminus
sp_v3.0_unigene128493 SustainPine v3.0 613
AutoFact: RecName: Full=Poly [ADP-ribose] polymerase 1; Short=PARP-1; AltName: Full=NAD(+) ADP-ribosyltransferase 1; Short=ADPRT-1; AltName: Full=Poly[ADP-ribose] synthase 1 gb|AAC79704.1| poly(ADP)-ribose polymerase [Zea mays] 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 1 4.479e-13
C-terminus
sp_v3.0_unigene128985 SustainPine v3.0 674
AutoFact: Unassigned protein
FL-Next: sp=Probable exocyst complex component 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene133201 SustainPine v3.0 380
AutoFact: Poly [ADP-ribose] polymerase 2 n=2 Tax=Arabidopsis RepID=PARP2_ARATH 7.0e-12
FL-Next: sp=Poly [ADP-ribose] polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148678 SustainPine v3.0 388
AutoFact: E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] ref|NP_001119465.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97324.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97328.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] 9.0e-21
FL-Next: Isoform 2 of E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 0.0
Internal
sp_v3.0_unigene154429 SustainPine v3.0 394
AutoFact: mitochondrial DNA polymerase A [Dictyostelium discoideum AX4] gb|AAO12053.1| mitochondrial DNA polymerase A [Dictyostelium discoideum] gb|EAL73185.1| mitochondrial DNA polymerase A [Dictyostelium discoideum AX4] 6.0e-33
FL-Next: tr=DNA polymerase I; Nannochloropsis gaditana CCMP526. 0.0
Sma3: Putative PolI-like DNA polymerase 2.668e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain