Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Toll/interleukin-1 receptor homology (TIR) domain

Term: IPR000157  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159635 SustainPine v3.0 269
• AutoFact: Putative NBS-LRR protein G8029 (Fragment) n=2 Tax=Pinus monticola RepID=Q6WE85_PINMO 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159668 SustainPine v3.0 168
• AutoFact: Putative NBS-LRR protein G6236 (Fragment) n=2 Tax=Pinus monticola RepID=Q6WE71_PINMO 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159683 SustainPine v3.0 432
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 0.0
• FL-Next: tr=Putative TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 7.196e-09
N-terminus
sp_v3.0_unigene159725 SustainPine v3.0 356
• AutoFact: Unassigned protein 3.0e-19
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene159734 SustainPine v3.0 309
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.542e-13
Internal
sp_v3.0_unigene159748 SustainPine v3.0 442
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.97e-37
Internal
sp_v3.0_unigene159773 SustainPine v3.0 423
• AutoFact: GK15001 gene product from transcript GK15001-RA 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.351e-07
Internal
sp_v3.0_unigene159789 SustainPine v3.0 377
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene159832 SustainPine v3.0 485
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.359e-16
Internal
sp_v3.0_unigene159855 SustainPine v3.0 236
• AutoFact: TIR/P-loop/LRR n=1 Tax=Pinus taeda RepID=Q8L8J0_PINTA 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TIR/P-loop/LRR 5.361e-06
Putative C-terminus
sp_v3.0_unigene159857 SustainPine v3.0 125
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene159881 SustainPine v3.0 362
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene159903 SustainPine v3.0 433
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 6.0e-25
• FL-Next: tr=Putative TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
N-terminus
sp_v3.0_unigene159924 SustainPine v3.0 146
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 6.0e-07
• FL-Next: tr=Putative TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Internal
sp_v3.0_unigene159954 SustainPine v3.0 208
• AutoFact: Tir-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9MZW4_POPTR 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene160060 SustainPine v3.0 456
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene160130 SustainPine v3.0 230
• AutoFact: Putative NBS-LRR protein G8106 (Fragment) n=1 Tax=Pinus monticola RepID=Q6WE84_PINMO 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Resistance gene homolog, . 8.285e-06
Internal
sp_v3.0_unigene160197 SustainPine v3.0 154
• AutoFact: TIR/NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J1_PINTA 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TIR/NBS 7.797e-06
Internal
sp_v3.0_unigene160219 SustainPine v3.0 303
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 4.883e-11
Internal
sp_v3.0_unigene160328 SustainPine v3.0 447
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain