Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: LisH dimerisation motif

Term: IPR006594  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene97275 SustainPine v3.0 643
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 5.389e-12
N-terminus
sp_v3.0_unigene97473 SustainPine v3.0 320
AutoFact: WD-40 repeat protein-like (Fragment) n=1 Tax=Populus suaveolens RepID=Q1HIU4_9ROSI 1.0e-08
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Internal
sp_v3.0_unigene97537 SustainPine v3.0 488
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 2.0e-25
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-40 repeat protein-like 2.963e-07
Internal
sp_v3.0_unigene97954 SustainPine v3.0 426
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 8.705e-12
N-terminus
sp_v3.0_unigene98781 SustainPine v3.0 716
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 2.547e-09
Internal
sp_v3.0_unigene99427 SustainPine v3.0 654
AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 5.0e-38
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene99811 SustainPine v3.0 399
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene100070 SustainPine v3.0 262
AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 9.0e-22
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcriptional corepressor LEUNIG 2.922e-08
Internal
sp_v3.0_unigene100399 SustainPine v3.0 652
AutoFact: LisH domain containing protein 3.0e-05
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene101364 SustainPine v3.0 812
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 5.389e-12
Putative N-terminus
sp_v3.0_unigene103236 SustainPine v3.0 492
AutoFact: LisH and RanBPM domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4HTG9_ARATH 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pg4 1.902e-09
C-terminus
sp_v3.0_unigene103311 SustainPine v3.0 701
AutoFact: HEAT repeat-containing protein [Arabidopsis thaliana] gb|AAL47427.1| AT5g16210/T21H19_130 [Arabidopsis thaliana] gb|AED92261.1| HEAT repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene103859 SustainPine v3.0 427
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 2 1.869e-08
Internal
sp_v3.0_unigene104134 SustainPine v3.0 635
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 1.0e-12
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 6.071e-06
C-terminus
sp_v3.0_unigene104486 SustainPine v3.0 381
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 7.615e-12
Internal
sp_v3.0_unigene104492 SustainPine v3.0 509
AutoFact: Unassigned protein
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105191 SustainPine v3.0 246
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 4.0e-25
FL-Next: sp=Probable polyamine oxidase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105276 SustainPine v3.0 323
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 4.0e-24
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 5.701e-10
Internal
sp_v3.0_unigene106018 SustainPine v3.0 449
AutoFact: mannose-binding lectin-like protein [Arabidopsis thaliana] gb|AAL32575.1| Unknown protein [Arabidopsis thaliana] gb|AAL91614.1| At1g19720/F14P1_33 [Arabidopsis thaliana] gb|AAN15429.1| Unknown protein [Arabidopsis thaliana] gb|AEE29888.1| mannose-binding 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene106095 SustainPine v3.0 755
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.302e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain