Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribulose bisphosphate carboxylase, large subunit, C-terminal

Term: IPR000685  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene121 SustainPine v3.0 2431
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 1.161e-36
Complete
sp_v3.0_unigene13840 SustainPine v3.0 2555
AutoFact: F12K21.3 n=2 Tax=Arabidopsis thaliana RepID=Q9LNM5_ARATH 0.0
FL-Next: tr=Transmembrane protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Complete
sp_v3.0_unigene14301 SustainPine v3.0 384
AutoFact: Unassigned protein
FL-Next: tr=Cell wall-associated hydrolase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus
sp_v3.0_unigene15432 SustainPine v3.0 1756
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 1.213e-20
Complete
sp_v3.0_unigene18561 SustainPine v3.0 1101
AutoFact: diadenosine tetraphosphate hydrolase [Hyacinthus orientalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20878 SustainPine v3.0 1064
AutoFact: diadenosine tetraphosphate hydrolase [Hyacinthus orientalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene28889 SustainPine v3.0 545
AutoFact: F12K21.3 n=2 Tax=Arabidopsis thaliana RepID=Q9LNM5_ARATH 5.0e-09
FL-Next: tr=F21H2.12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Uncharacterized protein At1g34630.2 4.873e-06
Internal
sp_v3.0_unigene30468 SustainPine v3.0 1012
AutoFact: Diadenosine tetraphosphate hydrolase n=1 Tax=Hyacinthus orientalis RepID=Q5YJN3_HYAOR 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene35190 SustainPine v3.0 2147
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 0.0
FL-Next: sp=MATE efflux family protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 2.819e-37
Complete
sp_v3.0_unigene35978 SustainPine v3.0 566
AutoFact: MatE domain containing protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 8.496e-30
C-terminus
sp_v3.0_unigene36562 SustainPine v3.0 980
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 1.698e-38
C-terminus
sp_v3.0_unigene47755 SustainPine v3.0 2170
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 1.213e-20
Complete
sp_v3.0_unigene53734 SustainPine v3.0 402
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene59443 SustainPine v3.0 474
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine-1 8.811e-12
N-terminus
sp_v3.0_unigene59749 SustainPine v3.0 323
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NSF5_PICSI 1.0e-37
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 5.428e-28
Putative N-terminus
sp_v3.0_unigene61941 SustainPine v3.0 362
AutoFact: mate efflux-like protein [Arabidopsis thaliana] gb|AAM98128.1| unknown protein [Arabidopsis thaliana] gb|AAP31960.1| At1g15170 [Arabidopsis thaliana] gb|AEE29277.1| mate efflux-like protein [Arabidopsis thaliana] 1.0e-27
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 5.805e-27
Complete
sp_v3.0_unigene64491 SustainPine v3.0 109
AutoFact: Ribulose-1,5-bisphosphate carboxylase large subunit (Fragment) n=1 Tax=Agathis robusta RepID=Q9BAH7_AGARO 4.0e-11
FL-Next: sp=Ribulose bisphosphate carboxylase large chain 2; Pinus taeda (Loblolly pine). Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene75916 SustainPine v3.0 358
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 12 protein, putative 4.14e-35
Internal
sp_v3.0_unigene96256 SustainPine v3.0 269
AutoFact: Unassigned protein
FL-Next: tr=ORF40u; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Putative Complete
sp_v3.0_unigene102392 SustainPine v3.0 1447
AutoFact: pfam07002, Copine, Copine 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 1.09e-20
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain