Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene56835 SustainPine v3.0 297
AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.142e-29
Internal
sp_v3.0_unigene56985 SustainPine v3.0 364
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 6.0e-35
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 6.344e-19
Putative N-terminus
sp_v3.0_unigene57503 SustainPine v3.0 356
AutoFact: gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.256e-23
Putative Complete
sp_v3.0_unigene57727 SustainPine v3.0 449
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10PF2_ORYSJ 1.0e-37
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 4.833e-15
Putative C-terminus
sp_v3.0_unigene58324 SustainPine v3.0 452
AutoFact: putative clathrin assembly protein [Arabidopsis thaliana] sp|Q9LHS0.1|CAP10_ARATH RecName: Full=Putative clathrin assembly protein At5g35200 dbj|BAA98205.1| unnamed protein product [Arabidopsis thaliana] gb|AAL91173.1| unknown protein [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin assembly protein, putative 7.389e-13
Internal
sp_v3.0_unigene58756 SustainPine v3.0 492
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 2.0e-35
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.135e-14
N-terminus
sp_v3.0_unigene58918 SustainPine v3.0 274
AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 5.0e-15
FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus
sp_v3.0_unigene58988 SustainPine v3.0 426
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-27
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Putative gag-pol polyprotein, identical 5.171e-08
C-terminus
sp_v3.0_unigene59349 SustainPine v3.0 422
AutoFact: Embryo globulin n=2 Tax=Triticeae RepID=Q03678_HORVU 2.0e-36
FL-Next: tr=Vicilin-like storage protein; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene59603 SustainPine v3.0 316
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.142e-25
Putative Complete
sp_v3.0_unigene60981 SustainPine v3.0 248
AutoFact: Reverse transcriptase (Fragment) n=3 Tax=Eleocharis cellulosa RepID=D5LVM7_9POAL 1.0e-28
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene61349 SustainPine v3.0 327
AutoFact: Unassigned protein
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Sma3: Polyprotein 7.125e-14
Internal
sp_v3.0_unigene61376 SustainPine v3.0 213
AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Spirogyra sp. FWAC125 RepID=A6MWT3_9VIRI 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene61437 SustainPine v3.0 341
AutoFact: putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] sp|Q9ZUI0.1|Y2241_ARATH RecName: Full=Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130; Flags: Precursor gb|AAD03374.1| putative receptor- 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_60, whole genome shotgun sequence 6.069e-08
Internal
sp_v3.0_unigene61763 SustainPine v3.0 249
AutoFact: UPF0066 domain containing protein 2.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene61816 SustainPine v3.0 349
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 2.0e-28
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.805e-29
N-terminus
sp_v3.0_unigene61860 SustainPine v3.0 239
AutoFact: MtN3_slv domain containing protein 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome c oxidoreductase 1.123e-13
Internal
sp_v3.0_unigene61932 SustainPine v3.0 207
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q53P05_ORYSJ 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.429e-32
Complete
sp_v3.0_unigene62036 SustainPine v3.0 320
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyprotein 5.005e-28
Putative Complete
sp_v3.0_unigene62046 SustainPine v3.0 246
AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FW76_ORYSJ 2.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.938e-09
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain