Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene33168 SustainPine v3.0 581
• AutoFact: Alpha-expansin 8, putative n=1 Tax=Ricinus communis RepID=B9T3P8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene33807 SustainPine v3.0 2898
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein 2.063e-24
Complete
sp_v3.0_unigene34178 SustainPine v3.0 1280
• AutoFact: FtsZ protein [Gentiana lutea] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 3.094e-27
C-terminus
sp_v3.0_unigene34532 SustainPine v3.0 631
• AutoFact: Expansin 2 n=1 Tax=Zinnia violacea RepID=Q9LLB2_ZINEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene34782 SustainPine v3.0 890
• AutoFact: putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EMP/nonaspanin domain family protein 1.796e-15
Internal
sp_v3.0_unigene35323 SustainPine v3.0 468
• AutoFact: Acetyl-CoA carboxylase n=7 Tax=rosids RepID=D2CFN2_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA carboxylase 6.515e-18
Putative N-terminus
sp_v3.0_unigene35549 SustainPine v3.0 413
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene36205 SustainPine v3.0 657
• AutoFact: MtN3_slv domain containing protein 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c oxidoreductase 1.195e-08
Putative C-terminus
sp_v3.0_unigene36243 SustainPine v3.0 764
• AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 6.0e-28
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.52e-36
Putative N-terminus
sp_v3.0_unigene36734 SustainPine v3.0 2544
• AutoFact: chloroplast biotin carboxylase [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene37268 SustainPine v3.0 427
• AutoFact: MtN3_slv domain containing protein 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 1.182e-08
Internal
sp_v3.0_unigene37720 SustainPine v3.0 2114
• AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
• FL-Next: sp=Scarecrow-like transcription factor PAT1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Scarecrow-like 1 transcription factor 0.0
Complete
sp_v3.0_unigene37753 SustainPine v3.0 1614
• AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 1.465e-26
Putative C-terminus
sp_v3.0_unigene38962 SustainPine v3.0 987
• AutoFact: XRCC4 homolog [Populus nigra] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 5.783e-06
N-terminus
sp_v3.0_unigene40535 SustainPine v3.0 867
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene40536 SustainPine v3.0 1066
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
Complete
sp_v3.0_unigene40608 SustainPine v3.0 1303
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.93e-15
Putative Complete
sp_v3.0_unigene42387 SustainPine v3.0 1432
• AutoFact: RimM-like 16S rRNA processing protein [Arabidopsis thaliana] dbj|BAB10810.1| unnamed protein product [Arabidopsis thaliana] gb|AED95383.1| RimM-like 16S rRNA processing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Probable UDP-N-acetylglucosamine pyrophosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: cDNA clone:J013060F08, full insert sequence 5.848e-06
Putative N-terminus
sp_v3.0_unigene42494 SustainPine v3.0 766
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 1.477e-24
Putative Complete
sp_v3.0_unigene44550 SustainPine v3.0 577
• AutoFact: Leucine-rich repeat receptor protein kinase EXS, putative n=1 Tax=Ricinus communis RepID=B9SM68_RICCO 0.0
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Flagellin-sensing 2-like protein 6.573e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain