Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S12/S23

Term: IPR006032  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene46072 SustainPine v3.0 1465
• AutoFact: MAP3K epsilon protein kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.511e-13
Putative C-terminus
sp_v3.0_unigene51477 SustainPine v3.0 384
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.626e-32
Putative N-terminus
sp_v3.0_unigene53458 SustainPine v3.0 435
• AutoFact: receptor protein kinase [Pinus sylvestris] 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flagellin-sensing 2-like protein 1.4013e-45
Internal
sp_v3.0_unigene53898 SustainPine v3.0 270
• AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 4.343e-07
Putative N-terminus
sp_v3.0_unigene63269 SustainPine v3.0 244
• AutoFact: auxin response factor 10 [Arabidopsis thaliana] sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10 gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana] gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana] gb|AAD20 1.0e-32
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 1.4013e-45
Internal
sp_v3.0_unigene65980 SustainPine v3.0 374
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 4.449e-28
N-terminus
sp_v3.0_unigene66038 SustainPine v3.0 407
• AutoFact: pfam00847, AP2, AP2 domain 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene66565 SustainPine v3.0 337
• AutoFact: pfam00847, AP2, AP2 domain 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 6.303e-22
N-terminus
sp_v3.0_unigene68544 SustainPine v3.0 297
• AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 1.00053e-42
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 6.01858e-42
Internal
sp_v3.0_unigene68583 SustainPine v3.0 311
• AutoFact: Putative 40S ribosomal protein n=1 Tax=Zea mays RepID=Q8H6J0_MAIZE 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 2.507e-07
C-terminus
sp_v3.0_unigene70205 SustainPine v3.0 422
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 6.277e-16
N-terminus
sp_v3.0_unigene73490 SustainPine v3.0 434
• AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Putative Complete
sp_v3.0_unigene74649 SustainPine v3.0 345
• AutoFact: Unassigned protein
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 1.703e-25
Internal
sp_v3.0_unigene75215 SustainPine v3.0 173
• AutoFact: Ethylene-responsive transcription factor ERF016 n=2 Tax=Arabidopsis RepID=ERF16_ARATH 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77487 SustainPine v3.0 378
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA5_POPTR 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.832e-26
N-terminus
sp_v3.0_unigene77820 SustainPine v3.0 336
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Trichinella spiralis RepID=E5S4A3_TRISP 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.691e-10
C-terminus
sp_v3.0_unigene78224 SustainPine v3.0 238
• AutoFact: Auxin response factor 27 n=1 Tax=Zea mays RepID=D9HNV4_MAIZE 6.0e-18
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 2.912e-28
Internal
sp_v3.0_unigene79024 SustainPine v3.0 388
• AutoFact: 37S ribosomal protein S12 n=2 Tax=Metarhizium RepID=E9E299_METAQ 1.0e-35
• FL-Next: sp=Ribosomal protein S12, mitochondrial; Pinus sylvestris (Scots pine). Mitochondrion. 0.0
• Sma3: Ribosomal protein S12 0.0
C-terminus
sp_v3.0_unigene81338 SustainPine v3.0 158
• AutoFact: Ribosomal protein rps23 (Fragment) n=2 Tax=Glycera tridactyla RepID=F1DB68_9ANNE 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene81517 SustainPine v3.0 115
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain