Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA/RNA-binding protein Alba-like

Term: IPR002775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene97707 SustainPine v3.0 311
AutoFact: aspartic proteinase nepenthesin II -like [Oryza sativa Japonica Group] 4.0e-21
FL-Next: sp=Aspartic proteinase-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104337 SustainPine v3.0 272
AutoFact: Chloroplast nucleoid DNA-binding protein-like protein n=2 Tax=Oryza sativa RepID=Q7XJ13_ORYSJ 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene126180 SustainPine v3.0 452
AutoFact: aspartyl protease family protein [Arabidopsis thaliana] gb|ACE79041.1| At4g35880 [Arabidopsis thaliana] dbj|BAH19546.1| AT4G35880 [Arabidopsis thaliana] gb|AEE86584.1| aspartyl protease family protein [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative chloroplast nucleoid DNA-binding protein 6.117e-08
Internal
sp_v3.0_unigene129409 SustainPine v3.0 352
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] gb|AAF88114.1|AC021043_7 Unknown protein [Arabidopsis thaliana] gb|AAK97729.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAL31130.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAM63005.1| unknown [A 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene142869 SustainPine v3.0 179
unknown
sp_v3.0_unigene185118 SustainPine v3.0 704
AutoFact: aspartyl protease family protein [Arabidopsis thaliana] gb|ACE79041.1| At4g35880 [Arabidopsis thaliana] dbj|BAH19546.1| AT4G35880 [Arabidopsis thaliana] gb|AEE86584.1| aspartyl protease family protein [Arabidopsis thaliana] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene190190 SustainPine v3.0 397
AutoFact: GRP multi-domain protein 2.0e-11
Sma3: Putative glycine rich protein 6.261e-22
coding
sp_v3.0_unigene195675 SustainPine v3.0 365
AutoFact: Alba domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene205666 SustainPine v3.0 431
AutoFact: GRP multi-domain protein 3.0e-14
Sma3: Putative glycine rich protein 1.101e-24
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain