Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S30

Term: IPR006846  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene152713 SustainPine v3.0 418
AutoFact: Ribosomal_S30 domain containing protein 3.0e-13
unknown
sp_v3.0_unigene152766 SustainPine v3.0 462
AutoFact: Ribosomal protein, small subunit protein 30, confirmed by transcript evidence n=5 Tax=Caenorhabditis RepID=Q18231_CAEEL 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene153650 SustainPine v3.0 197
AutoFact: PREDICTED: ubiquitin-like protein FUBI-like n=1 Tax=Anolis carolinensis RepID=UPI0001F9A243 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 0.0
Putative Complete
sp_v3.0_unigene153663 SustainPine v3.0 272
AutoFact: Ribosomal protein S30 n=2 Tax=Chlamydomonadales RepID=A8JF66_CHLRE 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene166177 SustainPine v3.0 184
AutoFact: 40S ribosomal protein S30 [Neurospora crassa OR74A] gb|EAA35670.1| 40S ribosomal protein S30 [Neurospora crassa OR74A] gb|EGO51537.1| hypothetical protein NEUTE1DRAFT_118436 [Neurospora tetrasperma FGSC 2508] 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
N-terminus
sp_v3.0_unigene186156 SustainPine v3.0 476
AutoFact: ubiquitin-like protein/ribosomal protein [Phytophthora infestans T30-4] gb|AAY43412.1| ubiquitin-like protein/ribosomal protein [Phytophthora infestans] gb|EEY52907.1| ubiquitin-like protein/ribosomal protein [Phytophthora infestans T30-4] 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene191718 SustainPine v3.0 193
AutoFact: 40S ribosomal protein S30 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q9S8_9MYCE 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene192887 SustainPine v3.0 414
AutoFact: Ribosomal_S30 domain containing protein 6.0e-25
Sma3: Ribosomal protein S30 3.362e-17
coding
sp_v3.0_unigene192984 SustainPine v3.0 463
AutoFact: 40S ribosomal protein S30 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q9S8_9MYCE 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene202867 SustainPine v3.0 486
AutoFact: PREDICTED: similar to rCG47344 n=1 Tax=Taeniopygia guttata RepID=UPI000194E462 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene203380 SustainPine v3.0 480
AutoFact: Ribosomal protein S30 containing protein [Tetrahymena thermophila] pdb|2XZM|X Chain X, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 p 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene207871 SustainPine v3.0 430
AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene207957 SustainPine v3.0 320
AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain