Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1

Term: IPR001578  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20326 SustainPine v3.0 686
AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 0.0
FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin h 0.0
Complete
sp_v3.0_unigene22993 SustainPine v3.0 553
AutoFact: Thioredoxin n=1 Tax=Daphnia pulex RepID=E9GC11_DAPPU 1.0e-28
FL-Next: sp=Thioredoxin H5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Thioredoxin H-type 3.026e-18
Complete
sp_v3.0_unigene26023 SustainPine v3.0 983
AutoFact: DUF659 domain containing protein 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene26999 SustainPine v3.0 890
AutoFact: S-locus lectin protein kinase-like protein [Arabidopsis thaliana] sp|O64477.1|Y2913_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130; Flags: Precursor gb|AAD12030.1| putative receptor-like protein kinase [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative S-domain receptor-like protein kinase 3.104e-15
Putative Complete
sp_v3.0_unigene28869 SustainPine v3.0 365
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.152e-11
C-terminus
sp_v3.0_unigene33075 SustainPine v3.0 819
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene34084 SustainPine v3.0 1564
AutoFact: Amino acid permease (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H4M6_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 0.0
Complete
sp_v3.0_unigene34217 SustainPine v3.0 821
AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L3A6_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.398e-10
Putative Complete
sp_v3.0_unigene34917 SustainPine v3.0 1724
AutoFact: Ubiquitin carboxyl-terminal hydrolase isozyme L5, putative n=1 Tax=Ricinus communis RepID=B9S046_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene35527 SustainPine v3.0 830
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 4.97099e-40
Complete
sp_v3.0_unigene36372 SustainPine v3.0 725
AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 7.0e-25
FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin h 0.0
Putative Complete
sp_v3.0_unigene36884 SustainPine v3.0 374
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.839e-12
Internal
sp_v3.0_unigene37240 SustainPine v3.0 1437
AutoFact: Amino acid permease-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z940_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 0.0
Misassembled
sp_v3.0_unigene38180 SustainPine v3.0 979
AutoFact: DUF659 domain containing protein 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 4.023e-06
Putative Complete
sp_v3.0_unigene38240 SustainPine v3.0 1548
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene38382 SustainPine v3.0 2285
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBQ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene38389 SustainPine v3.0 1620
AutoFact: DUF659 domain containing protein 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene38536 SustainPine v3.0 2003
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 2.096e-06
Putative Complete
sp_v3.0_unigene38542 SustainPine v3.0 1016
AutoFact: DUF659 domain containing protein 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene38577 SustainPine v3.0 971
AutoFact: DUF659 domain containing protein 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain