Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1

Term: IPR001578  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene110996 SustainPine v3.0 337
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.44e-12
Putative N-terminus
sp_v3.0_unigene113453 SustainPine v3.0 453
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene113636 SustainPine v3.0 538
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT dimerisation domain-containing protein-like 5.092e-07
Putative Complete
sp_v3.0_unigene113880 SustainPine v3.0 465
AutoFact: DUF659 domain containing protein 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 9.9e-06
Internal
sp_v3.0_unigene114361 SustainPine v3.0 210
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49170, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2261; Flags: Precursor gb|AAW62962.1| emb 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 1.639e-08
Internal
sp_v3.0_unigene114364 SustainPine v3.0 484
AutoFact: putatative protein [Arabidopsis thaliana] emb|CAB78921.1| putatative protein [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 6.825e-12
Internal
sp_v3.0_unigene114659 SustainPine v3.0 289
AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 9.66e-10
Internal
sp_v3.0_unigene120294 SustainPine v3.0 199
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] dbj|BAB11068.1| unnamed protein product [Arabidopsis thaliana] gb|AAV63932.1| hypothetical protein At5g48040 [Arabidopsis thaliana] gb|AED95613.1| ubiquitin carboxyl-terminal hydrol 5.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene120708 SustainPine v3.0 483
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26782, mitochondrial; Flags: Precursor dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thal 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 5.991e-09
Putative C-terminus
sp_v3.0_unigene120952 SustainPine v3.0 331
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 8.052e-08
N-terminus
sp_v3.0_unigene121641 SustainPine v3.0 238
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.58e-15
Internal
sp_v3.0_unigene121754 SustainPine v3.0 797
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 2.101e-14
Putative C-terminus
sp_v3.0_unigene121973 SustainPine v3.0 219
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.26e-13
Internal
sp_v3.0_unigene122583 SustainPine v3.0 401
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.637e-15
N-terminus
sp_v3.0_unigene123722 SustainPine v3.0 331
AutoFact: ubiquitin thiolesterase [Arabidopsis thaliana] gb|AAL06935.1| AT3g58520/F14P22_110 [Arabidopsis thaliana] gb|AAM91040.1| AT3g58520/F14P22_110 [Arabidopsis thaliana] gb|AEE79794.1| ubiquitin thiolesterase [Arabidopsis thaliana] 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene123803 SustainPine v3.0 241
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.379e-07
Internal
sp_v3.0_unigene124289 SustainPine v3.0 351
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 3.5e-14
Internal
sp_v3.0_unigene124440 SustainPine v3.0 377
AutoFact: Putative pentatricopeptide repeat protein n=5 Tax=Malvoideae RepID=B2ZAT1_9ROSI 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.052e-09
N-terminus
sp_v3.0_unigene124649 SustainPine v3.0 195
AutoFact: Pentatricopeptide repeat n=1 Tax=Eutrema parvulum RepID=E5F734_9BRAS 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 3.536e-13
Putative C-terminus
sp_v3.0_unigene124852 SustainPine v3.0 220
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 2.247e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain