Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1

Term: IPR001578  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene78932 SustainPine v3.0 416
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.668e-11
Putative N-terminus
sp_v3.0_unigene79198 SustainPine v3.0 236
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520 dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AED98224.1| pentatricope 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 3.157e-12
Internal
sp_v3.0_unigene79538 SustainPine v3.0 210
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide 1.465e-07
Internal
sp_v3.0_unigene79774 SustainPine v3.0 207
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350 dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AED94423.1| pentatricope 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 6.28e-11
Internal
sp_v3.0_unigene80040 SustainPine v3.0 186
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.118e-12
Internal
sp_v3.0_unigene80798 SustainPine v3.0 356
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Sma3: Putative uncharacterized protein At2g31740 3.541e-09
Internal
sp_v3.0_unigene81154 SustainPine v3.0 210
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758 gb|AEE86306.1| pentatricopeptide repeat-containing 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.668e-12
Internal
sp_v3.0_unigene81680 SustainPine v3.0 224
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.868e-10
Internal
sp_v3.0_unigene95241 SustainPine v3.0 858
• AutoFact: DUF659 domain containing protein 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene95488 SustainPine v3.0 629
• AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] emb|CAC34490.1| putative protein [Arabidopsis thaliana] gb|AAM97112.1| unknown protein [Arabidopsis thaliana] gb|AAO73893.1| expressed protein [Arabidopsis thaliana] dbj|BAE99118.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene97076 SustainPine v3.0 665
• AutoFact: Plant-specific family protein RPD1 n=1 Tax=Arabidopsis thaliana RepID=Q689D6_ARATH 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene97184 SustainPine v3.0 408
• AutoFact: Amino acid permease-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z940_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Amino acid permease 0.0
Internal
sp_v3.0_unigene97342 SustainPine v3.0 344
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene98370 SustainPine v3.0 375
• AutoFact: DUF659 domain containing protein 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene98491 SustainPine v3.0 528
• AutoFact: Unassigned protein
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene98522 SustainPine v3.0 335
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.669e-19
Internal
sp_v3.0_unigene98601 SustainPine v3.0 531
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transposase-like protein 3.426e-06
Internal
sp_v3.0_unigene99122 SustainPine v3.0 256
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.116e-10
Internal
sp_v3.0_unigene99290 SustainPine v3.0 345
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.621e-16
Internal
sp_v3.0_unigene99307 SustainPine v3.0 567
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 2.89e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain