Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: T-complex protein 1, epsilon subunit

Term: IPR012718  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17558 SustainPine v3.0 2364
• AutoFact: T complex protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31500 SustainPine v3.0 472
• AutoFact: PREDICTED: chaperonin containing Tcp1, subunit 5 (epsilon)-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBB48D 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 1.072e-11
C-terminus
sp_v3.0_unigene34885 SustainPine v3.0 2521
• AutoFact: T complex protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene58231 SustainPine v3.0 425
• AutoFact: T complex protein 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 7.447e-12
N-terminus
sp_v3.0_unigene60523 SustainPine v3.0 315
• AutoFact: T complex protein 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 2.662e-12
Putative N-terminus
sp_v3.0_unigene71951 SustainPine v3.0 173
• AutoFact: Chaperonin containing t-complex protein 1, beta subunit, tcpb, putative n=1 Tax=Ricinus communis RepID=B9R8I3_RICCO 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1, alpha subunit 4.149e-25
Internal
sp_v3.0_unigene75208 SustainPine v3.0 405
• AutoFact: T-complex protein 1 subunit delta n=1 Tax=Physarum polycephalum RepID=Q8T5T6_PHYPO 1.0e-37
• FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1, delta subunit 0.0
N-terminus
sp_v3.0_unigene129548 SustainPine v3.0 425
• AutoFact: T complex protein 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 9.398e-12
N-terminus
sp_v3.0_unigene130303 SustainPine v3.0 688
• AutoFact: T-complex protein 1 subunit epsilon n=6 Tax=core eudicotyledons RepID=TCPE_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 1.426e-11
N-terminus
sp_v3.0_unigene137581 SustainPine v3.0 476
• AutoFact: T-complex protein 1 subunit epsilon n=11 Tax=Poaceae RepID=TCPE1_AVESA 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 8.064e-12
C-terminus
sp_v3.0_unigene148782 SustainPine v3.0 372
• AutoFact: T complex protein 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 7.447e-12
N-terminus
sp_v3.0_unigene150649 SustainPine v3.0 372
• AutoFact: Elongation factor Tu n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWG4_9PROT 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Putative C-terminus
sp_v3.0_unigene151096 SustainPine v3.0 450
• AutoFact: Elongation factor Tu 1 n=2 Tax=Taylorella equigenitalis MCE9 RepID=E8UFB1_TAYEM 6.0e-33
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 4.509e-40
C-terminus
sp_v3.0_unigene153419 SustainPine v3.0 325
• AutoFact: Chaperonin complex component, TCP-1 beta subunit (CCT2) (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D11_OSTTA 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 1.072e-11
Putative C-terminus
sp_v3.0_unigene155183 SustainPine v3.0 550
• AutoFact: PREDICTED: chaperonin containing Tcp1, subunit 5 (epsilon)-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBB48D 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 1.521e-11
C-terminus
sp_v3.0_unigene155728 SustainPine v3.0 326
• AutoFact: Chaperonin-containing TCP-1 epsilon subunit (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XBP0_BIGNA 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 1.483e-11
Internal
sp_v3.0_unigene156722 SustainPine v3.0 261
• AutoFact: Elongation factor Tu (Fragment) n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S153_9BURK 1.0e-26
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 1.706e-22
C-terminus
sp_v3.0_unigene157619 SustainPine v3.0 208
• AutoFact: Chaperonin containing TCP1 epsilon subunit n=2 Tax=Dictyosteliida RepID=D3BFC6_POLPA 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159910 SustainPine v3.0 392
• AutoFact: T-complex protein 1 subunit epsilon n=6 Tax=core eudicotyledons RepID=TCPE_ARATH 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 9.398e-12
N-terminus
sp_v3.0_unigene202674 SustainPine v3.0 672
• AutoFact: RecName: Full=T-complex protein 1 subunit epsilon; Short=TCP-1-epsilon; AltName: Full=CCT-epsilon; AltName: Full=TCP-K19 emb|CAA53396.1| T complex polypeptide 1 [Avena sativa] 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 8.064e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain