Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L7Ae/L30e/S12e/Gadd45

Term: IPR004038  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158576 SustainPine v3.0 328
• AutoFact: 60S ribosomal protein L7a-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MXP8_PHYIT 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene158704 SustainPine v3.0 264
• AutoFact: Ribosomal protein L7a n=1 Tax=Ixodes pacificus RepID=Q6B897_9ACAR 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene158867 SustainPine v3.0 203
• AutoFact: 60S ribosomal protein L7a-2 [Arabidopsis thaliana] sp|Q9LZH9.1|RL7A2_ARATH RecName: Full=60S ribosomal protein L7a-2 emb|CAB83137.1| 60S RIBOSOMAL PROTEIN L7A protein [Arabidopsis thaliana] gb|AAK97734.1| AT3g62870/F26K9_300 [Arabidopsis thaliana] gb|AAL3 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 6.823e-09
Internal
sp_v3.0_unigene159068 SustainPine v3.0 447
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Spadella cephaloptera RepID=A8E6B1_9BILA 1.0e-29
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
N-terminus
sp_v3.0_unigene159185 SustainPine v3.0 264
• AutoFact: PREDICTED: similar to ribosomal protein L30 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000583DDC 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 8.348e-18
N-terminus
sp_v3.0_unigene159276 SustainPine v3.0 316
• AutoFact: 60S ribosomal protein L7a-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MXP8_PHYIT 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene159720 SustainPine v3.0 302
• AutoFact: PREDICTED: 60S ribosomal protein L30-like [Mus musculus] 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.603e-21
Putative Complete
sp_v3.0_unigene159860 SustainPine v3.0 483
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Eurythoe complanata RepID=A8UFV4_EURCO 3.9937e-43
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Putative Complete
sp_v3.0_unigene160740 SustainPine v3.0 209
• AutoFact: Probable RPL30-60S large subunit ribosomal protein L30.e n=1 Tax=Sporisorium reilianum RepID=E6ZRC9_9BASI 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 9.412e-12
N-terminus
sp_v3.0_unigene162785 SustainPine v3.0 138
• AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] gb|AAK32786.1|AF361618_1 AT4g12600/T1P17_190 [Arabidopsis thaliana] emb|CAB53753.1| Ribosomal protein L7Ae-like [Arabidopsis thaliana] emb|CAB78303.1| Ribosomal protein L7Ae-lik 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.399e-08
Internal
sp_v3.0_unigene164673 SustainPine v3.0 180
• AutoFact: 60S ribosomal protein L7a [Danio rerio] gb|AAH59533.1| Ribosomal protein L7a [Danio rerio] gb|AAH71352.1| Ribosomal protein L7a [Danio rerio] emb|CAN88769.1| ribosomal protein L7a [Danio rerio] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.264e-09
Internal
sp_v3.0_unigene165411 SustainPine v3.0 436
• AutoFact: 60S ribosomal protein L8-B n=4 Tax=Pleosporineae RepID=B2VZ06_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.264e-09
C-terminus
sp_v3.0_unigene166506 SustainPine v3.0 288
• AutoFact: 50S ribosomal protein L7Ae n=3 Tax=Pleosporineae RepID=B2WJB2_PYRTR 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.399e-08
N-terminus
sp_v3.0_unigene166923 SustainPine v3.0 458
• AutoFact: 60S ribosomal protein L7a-1 n=4 Tax=Arabidopsis RepID=RL7A1_ARATH 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.023e-08
C-terminus
sp_v3.0_unigene183084 SustainPine v3.0 517
• AutoFact: Nucleolar protein family A n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGX1_9EUKA 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene184431 SustainPine v3.0 647
• AutoFact: 40S ribosomal protein S12 n=2 Tax=Onchocercidae RepID=E1FX90_LOALO 1.0e-28
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 2.442e-08
Complete
sp_v3.0_unigene186056 SustainPine v3.0 646
• AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Putative Complete
sp_v3.0_unigene186410 SustainPine v3.0 483
• AutoFact: 60S ribosomal protein L7a-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MXP8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.124e-08
N-terminus
sp_v3.0_unigene188396 SustainPine v3.0 549
• AutoFact: ribosomal protein L7A [Bombyx mori] gb|AAV34817.1| ribosomal protein L7A [Bombyx mori] 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.032e-08
Putative C-terminus
sp_v3.0_unigene188941 SustainPine v3.0 479
• AutoFact: 40S ribosomal protein S12 n=2 Tax=Branchiostoma belcheri RepID=Q8ISP4_BRABE 0.0
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain