Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L7Ae/L30e/S12e/Gadd45

Term: IPR004038  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150986 SustainPine v3.0 240
• AutoFact: PREDICTED: similar to ribosomal protein L30 isoform 1 n=2 Tax=Ciona intestinalis RepID=UPI00006A67A4 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 9.692e-18
C-terminus
sp_v3.0_unigene151054 SustainPine v3.0 115
• AutoFact: PREDICTED: similar to ribosomal protein L30 [Tribolium castaneum] gb|EFA13254.1| hypothetical protein TcasGA2_TC001524 [Tribolium castaneum] 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.623e-07
Putative N-terminus
sp_v3.0_unigene151192 SustainPine v3.0 403
• AutoFact: ribosomal protein L7 [Hyacinthus orientalis] 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 0.0
Putative Complete
sp_v3.0_unigene151199 SustainPine v3.0 376
• AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 3.279e-08
Putative Complete
sp_v3.0_unigene151258 SustainPine v3.0 341
• AutoFact: ribosomal protein [Pteris vittata] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.603e-21
Complete
sp_v3.0_unigene151283 SustainPine v3.0 452
• AutoFact: 60S ribosomal protein L30 [Aedes aegypti] ref|XP_001650519.1| 60S ribosomal protein L30 [Aedes aegypti] ref|XP_001650520.1| 60S ribosomal protein L30 [Aedes aegypti] gb|ABF18292.1| 60S ribosomal protein L30 [Aedes aegypti] gb|EAT43318.1| 60S ribosomal pro 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.354e-21
Complete
sp_v3.0_unigene151372 SustainPine v3.0 413
• AutoFact: 60S ribosomal protein L7A-like [Solanum tuberosum] 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.467e-08
C-terminus
sp_v3.0_unigene151450 SustainPine v3.0 315
• AutoFact: ribosomal protein L7A [Bigelowiella natans] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.251e-08
Internal
sp_v3.0_unigene151585 SustainPine v3.0 397
• AutoFact: Ribosomal protein L7a n=1 Tax=Pfiesteria piscicida RepID=E8Z674_PFIPI 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151605 SustainPine v3.0 282
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Perinereis aibuhitensis RepID=Q86PL3_PERAI 3.0e-26
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 2.442e-08
Internal
sp_v3.0_unigene151651 SustainPine v3.0 216
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Novocrania anomala RepID=B2YHX1_9BILA 6.0e-27
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Putative N-terminus
sp_v3.0_unigene151661 SustainPine v3.0 401
• AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd4, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0D1_PHYIT 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene151807 SustainPine v3.0 504
• AutoFact: pfam08569, Mo25, Mo25-like 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mo25 family protein 6.863e-13
C-terminus
sp_v3.0_unigene151912 SustainPine v3.0 420
• AutoFact: Ribosomal protein rpl30 n=4 Tax=Protostomia RepID=A8UGA5_EURCO 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.12e-17
Complete
sp_v3.0_unigene151969 SustainPine v3.0 498
• AutoFact: 40S ribosomal protein S12 n=2 Tax=Branchiostoma belcheri RepID=Q8ISP4_BRABE 4.99997e-41
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene151997 SustainPine v3.0 256
• AutoFact: Ribosomal protein rpl30 n=1 Tax=Lineus viridis RepID=B0Z9N1_9BILA 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 1.12e-17
C-terminus
sp_v3.0_unigene152032 SustainPine v3.0 378
• AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 4.296e-08
N-terminus
sp_v3.0_unigene152034 SustainPine v3.0 525
• AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_1 n=1 Tax=Blastocystis hominis RepID=D8LXA9_BLAHO 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene152179 SustainPine v3.0 255
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Chlorella variabilis RepID=E1ZI38_9CHLO 5.0e-32
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
N-terminus
sp_v3.0_unigene152305 SustainPine v3.0 469
• AutoFact: 40S ribosomal protein S12 n=1 Tax=Pinctada maxima RepID=C6JUN0_PINMA 2.00386e-43
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain