Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote

Term: IPR002415  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11235 SustainPine v3.0 1213
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17546 SustainPine v3.0 1171
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17950 SustainPine v3.0 718
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.106e-08
C-terminus
sp_v3.0_unigene20379 SustainPine v3.0 1184
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25827 SustainPine v3.0 475
AutoFact: 13 kDa ribonucleoprotein-associated protein n=2 Tax=Oomycetes RepID=D0NZI7_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 3.86e-08
Complete
sp_v3.0_unigene27862 SustainPine v3.0 515
AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd4, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0D1_PHYIT 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene29946 SustainPine v3.0 1365
AutoFact: ribosomal protein L7Ae-like [Brassica rapa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31566 SustainPine v3.0 488
AutoFact: Chain A, Structure Of A Human Prp31-15.5k-U4 Snrna Complex pdb|2OZB|D Chain D, Structure Of A Human Prp31-15.5k-U4 Snrna Complex 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 3.279e-08
Complete
sp_v3.0_unigene35523 SustainPine v3.0 1000
AutoFact: ribosomal protein L7Ae-like [Brassica rapa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37837 SustainPine v3.0 1255
AutoFact: ribosomal protein L7Ae-like [Brassica rapa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene57096 SustainPine v3.0 120
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TMM1_VITVI 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene75185 SustainPine v3.0 156
AutoFact: ribosomal protein L7Ae-like [Brassica rapa] 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 1.818e-08
Putative N-terminus
sp_v3.0_unigene76606 SustainPine v3.0 303
AutoFact: Ribosomal protein S6, putative n=1 Tax=Trypanosoma cruzi RepID=E7LLY0_TRYCR 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 3.279e-08
N-terminus
sp_v3.0_unigene100495 SustainPine v3.0 316
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150324 SustainPine v3.0 389
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 3.279e-08
Putative Complete
sp_v3.0_unigene150431 SustainPine v3.0 392
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 2.9e-08
Putative Complete
sp_v3.0_unigene150757 SustainPine v3.0 184
AutoFact: NHP2-like protein 1 homolog n=3 Tax=Caenorhabditis RepID=NH2L1_CAEEL 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 2.9e-08
C-terminus
sp_v3.0_unigene151192 SustainPine v3.0 403
AutoFact: ribosomal protein L7 [Hyacinthus orientalis] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 0.0
Putative Complete
sp_v3.0_unigene151199 SustainPine v3.0 376
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 3.279e-08
Putative Complete
sp_v3.0_unigene151661 SustainPine v3.0 401
AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd4, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0D1_PHYIT 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain