Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote

Term: IPR002415  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene152032 SustainPine v3.0 378
• AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 4.296e-08
N-terminus
sp_v3.0_unigene152034 SustainPine v3.0 525
• AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_1 n=1 Tax=Blastocystis hominis RepID=D8LXA9_BLAHO 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene152461 SustainPine v3.0 457
• AutoFact: H/aca ribonucleoprotein complex subunit 2-like protein n=2 Tax=Ictalurus RepID=E3TC44_9TELE 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Os06g0274200 protein 9.747e-06
C-terminus
sp_v3.0_unigene153033 SustainPine v3.0 124
• AutoFact: NHP2/L7aE family protein [Neurospora crassa OR74A] ref|XP_003348176.1| hypothetical protein SMAC_04021 [Sordaria macrospora k-hell] emb|CAC18221.2| probable 13 kD U4/U6.U5 snRNP associate protein [Neurospora crassa] gb|EAA32181.1| NHP2/L7aE family protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.9e-08
Internal
sp_v3.0_unigene153069 SustainPine v3.0 306
• AutoFact: ribosomal protein L7Ae [Dictyostelium discoideum AX4] gb|EAL62561.1| ribosomal protein L7Ae [Dictyostelium discoideum AX4] 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene153269 SustainPine v3.0 286
• AutoFact: PREDICTED: similar to hoip-prov protein [Strongylocentrotus purpuratus] ref|XP_001176138.1| PREDICTED: similar to hoip-prov protein [Strongylocentrotus purpuratus] 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.9e-08
Putative C-terminus
sp_v3.0_unigene153270 SustainPine v3.0 383
• AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
C-terminus
sp_v3.0_unigene153969 SustainPine v3.0 393
• AutoFact: PREDICTED: similar to nucleolar protein family A, member 2 (H/ACA small nucleolar RNPs) n=1 Tax=Ciona intestinalis RepID=UPI00006A7302 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
C-terminus
sp_v3.0_unigene154780 SustainPine v3.0 219
• AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Internal
sp_v3.0_unigene155385 SustainPine v3.0 352
• AutoFact: Nucleolar protein, small subunit of H/ACA snoRNPs n=3 Tax=Chlamydomonadales RepID=A8JB67_CHLRE 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene155498 SustainPine v3.0 366
• AutoFact: ribosomal protein l7ae [Aedes aegypti] ref|XP_001847839.1| 13 kDa ribonucleoprotein-associated protein [Culex quinquefasciatus] gb|ABF18367.1| 60S ribosomal protein 15.5kD/SNU13 [Aedes aegypti] gb|EAT45362.1| ribosomal protein l7ae [Aedes aegypti] gb|EDS2 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 3.279e-08
N-terminus
sp_v3.0_unigene157939 SustainPine v3.0 268
• AutoFact: snRNP subunit [Cryptococcus neoformans var. neoformans JEC21] ref|XP_774347.1| hypothetical protein CNBG3280 [Cryptococcus neoformans var. neoformans B-3501A] ref|XP_003195312.1| snRNP subunit [Cryptococcus gattii WM276] sp|P0CQ53.1|SNU13_CRYNB RecName: F 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.9e-08
C-terminus
sp_v3.0_unigene158398 SustainPine v3.0 348
• AutoFact: snRNP and snoRNP protein (Snu13), putative [Aspergillus clavatus NRRL 1] gb|EAW13811.1| snRNP and snoRNP protein (Snu13), putative [Aspergillus clavatus NRRL 1] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.447e-08
N-terminus
sp_v3.0_unigene162785 SustainPine v3.0 138
• AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] gb|AAK32786.1|AF361618_1 AT4g12600/T1P17_190 [Arabidopsis thaliana] emb|CAB53753.1| Ribosomal protein L7Ae-like [Arabidopsis thaliana] emb|CAB78303.1| Ribosomal protein L7Ae-lik 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.399e-08
Internal
sp_v3.0_unigene166506 SustainPine v3.0 288
• AutoFact: 50S ribosomal protein L7Ae n=3 Tax=Pleosporineae RepID=B2WJB2_PYRTR 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.399e-08
N-terminus
sp_v3.0_unigene183084 SustainPine v3.0 517
• AutoFact: Nucleolar protein family A n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGX1_9EUKA 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene186056 SustainPine v3.0 646
• AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Putative Complete
sp_v3.0_unigene189749 SustainPine v3.0 445
• AutoFact: PREDICTED: hoi-polloi-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBB923 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene193269 SustainPine v3.0 516
• AutoFact: U4/U6 small nuclear ribonucleoprotein SNU13 [Arabidopsis thaliana] gb|AAK82476.1| AT5g20160/F5O24_50 [Arabidopsis thaliana] gb|AAM16174.1| AT5g20160/F5O24_50 [Arabidopsis thaliana] gb|AAM64557.1| ribosomal protein L7Ae-like [Arabidopsis thaliana] gb|AED92 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.9e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain