Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Actin-binding, cofilin/tropomyosin type

Term: IPR002108  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11342 SustainPine v3.0 1272
AutoFact: putative actin depolymerizing factor [Sorghum bicolor] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene16922 SustainPine v3.0 1120
AutoFact: PREDICTED: actin depolymerizing factor isoform 1 [Vitis vinifera] sp|Q8SAG3.1|ADF_VITVI RecName: Full=Actin-depolymerizing factor; Short=ADF gb|AAL79826.1|AF440310_1 actin depolymerizing factor [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 5.307e-38
Complete
sp_v3.0_unigene17421 SustainPine v3.0 1013
AutoFact: PREDICTED: actin depolymerizing factor isoform 1 [Vitis vinifera] sp|Q8SAG3.1|ADF_VITVI RecName: Full=Actin-depolymerizing factor; Short=ADF gb|AAL79826.1|AF440310_1 actin depolymerizing factor [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25696 SustainPine v3.0 492
AutoFact: cofilin [Schizosaccharomyces pombe 972h-] sp|P78929.1|COFI_SCHPO RecName: Full=Cofilin; AltName: Full=Actin-depolymerizing factor 1 pdb|2I2Q|A Chain A, Fission Yeast Cofilin dbj|BAA14039.1| actin depolymerazing factor [Schizosaccharomyces pombe] emb|CAB11 8.0e-39
FL-Next: sp=Actin-depolymerizing factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin-depolymerizing factor 6.723e-08
Complete
sp_v3.0_unigene31549 SustainPine v3.0 608
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 4.591e-20
Complete
sp_v3.0_unigene31655 SustainPine v3.0 506
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 4.00001e-40
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: The actin binding protein cofilin-like protein 1.462e-06
Complete
sp_v3.0_unigene31903 SustainPine v3.0 456
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin depolymerizing factor, putative 4.947e-09
Complete
sp_v3.0_unigene31915 SustainPine v3.0 374
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene32430 SustainPine v3.0 623
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 6.985e-21
Complete
sp_v3.0_unigene32931 SustainPine v3.0 668
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.983e-28
Complete
sp_v3.0_unigene34144 SustainPine v3.0 1363
AutoFact: actin depolymerizing factor [Populus tremula x Populus alba] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34145 SustainPine v3.0 1235
AutoFact: actin depolymerizing factor 8 [Arabidopsis thaliana] sp|Q570Y6.2|ADF8_ARATH RecName: Full=Actin-depolymerizing factor 8; Short=ADF-8; Short=AtADF8 gb|AAM63658.1| putative actin-depolymerizing factor [Arabidopsis thaliana] gb|ABD60702.1| At4g00680 [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene52055 SustainPine v3.0 475
AutoFact: PREDICTED: actin depolymerizing factor isoform 1 [Vitis vinifera] sp|Q8SAG3.1|ADF_VITVI RecName: Full=Actin-depolymerizing factor; Short=ADF gb|AAL79826.1|AF440310_1 actin depolymerizing factor [Vitis vinifera] 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin depolymerizing factor, putative 4.548e-27
N-terminus
sp_v3.0_unigene54493 SustainPine v3.0 305
AutoFact: Unassigned protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene56013 SustainPine v3.0 328
AutoFact: RecName: Full=Actin-depolymerizing factor; Short=ADF emb|CAA78483.1| actin depolymerizing factor [Lilium longiflorum] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.927e-20
N-terminus
sp_v3.0_unigene62109 SustainPine v3.0 232
AutoFact: Actin-depolymerizing factor 12 n=5 Tax=Arabidopsis RepID=ADF12_ARATH 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 7 5.028e-09
Putative Complete
sp_v3.0_unigene64862 SustainPine v3.0 144
AutoFact: Actin depolymerizing factor-like protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCP0_CUCME 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene65639 SustainPine v3.0 184
AutoFact: Actin depolymerizing factor (Fragment) n=27 Tax=Pinaceae RepID=C6FCS5_PSEMZ 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.963e-27
Putative C-terminus
sp_v3.0_unigene69746 SustainPine v3.0 195
AutoFact: Unassigned protein 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene77058 SustainPine v3.0 228
AutoFact: Actin depolymerizing factor n=1 Tax=Rheum australe RepID=B5M1X3_RHEAU 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 2.908e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain