Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L38e

Term: IPR002675  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17367 SustainPine v3.0 1003
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25887 SustainPine v3.0 289
AutoFact: 60S ribosomal protein L38 [Scophthalmus maximus] 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 1.012e-18
Complete
sp_v3.0_unigene26887 SustainPine v3.0 930
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34104 SustainPine v3.0 1264
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 1.4013e-45
N-terminus
sp_v3.0_unigene35541 SustainPine v3.0 962
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9T6H4_RICCO 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene63882 SustainPine v3.0 192
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 9.065e-40
Internal
sp_v3.0_unigene64574 SustainPine v3.0 277
AutoFact: Calreticulin n=2 Tax=Salmoninae RepID=Q6UD79_ONCMY 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 4.2039e-45
Internal
sp_v3.0_unigene65771 SustainPine v3.0 258
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9T6H4_RICCO 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 5.435e-19
C-terminus
sp_v3.0_unigene74971 SustainPine v3.0 366
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 0.0
Internal
sp_v3.0_unigene79393 SustainPine v3.0 310
AutoFact: calreticulin [Arabidopsis thaliana] 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 5.701e-40
Misassembled
sp_v3.0_unigene96311 SustainPine v3.0 679
AutoFact: putative translation releasing factor 2 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Peptide chain release factor 2, putative 1.218e-08
C-terminus
sp_v3.0_unigene102756 SustainPine v3.0 636
AutoFact: putative translation releasing factor 2 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene119531 SustainPine v3.0 237
AutoFact: Calreticulin n=1 Tax=Polysphondylium pallidum RepID=D3BIF1_POLPA 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 4.90454e-44
Internal
sp_v3.0_unigene127143 SustainPine v3.0 1079
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 1.26117e-44
Misassembled
sp_v3.0_unigene127305 SustainPine v3.0 1277
AutoFact: Calreticulin n=1 Tax=Berberis stolonifera RepID=CALR_BERST 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 3.36312e-43
C-terminus
sp_v3.0_unigene127600 SustainPine v3.0 491
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 1.589e-37
Putative C-terminus
sp_v3.0_unigene129133 SustainPine v3.0 453
AutoFact: PDR-like ABC-transporter n=1 Tax=Glycine max RepID=Q1M2R7_SOYBN 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 9.226e-34
Internal
sp_v3.0_unigene130636 SustainPine v3.0 502
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 9.80909e-45
Internal
sp_v3.0_unigene140527 SustainPine v3.0 1091
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 0.0
N-terminus
sp_v3.0_unigene142251 SustainPine v3.0 1294
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Sma3: Calreticulin 1.23174e-42
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain