Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation protein SH3-like, subgroup

Term: IPR014722  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene65536 SustainPine v3.0 155
• AutoFact: ribosomal protein L2-like [Solanum tuberosum] 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L2 2.549e-08
Internal
sp_v3.0_unigene65558 SustainPine v3.0 301
• AutoFact: ribosomal protein L2-like [Solanum tuberosum] 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L2 1.467e-07
Internal
sp_v3.0_unigene65747 SustainPine v3.0 178
• AutoFact: ribosomal protein L2-like [Solanum tuberosum] 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70092 SustainPine v3.0 446
• AutoFact: Elongation factor EF-P n=2 Tax=Arabidopsis RepID=Q8VZW6_ARATH 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene74967 SustainPine v3.0 168
• AutoFact: eukaryotic translation initiation factor 5A [Picea abies] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 3.636e-17
Internal
sp_v3.0_unigene75500 SustainPine v3.0 203
• AutoFact: PREDICTED: similar to ribosomal protein L8 n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000585096 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 6.498e-09
Internal
sp_v3.0_unigene75777 SustainPine v3.0 363
• AutoFact: [K] COG0250 Transcription antiterminator 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75797 SustainPine v3.0 409
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=47 Tax=Magnoliophyta RepID=IF5A1_MEDSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor eIF5A 0.0
Putative N-terminus
sp_v3.0_unigene75976 SustainPine v3.0 329
• AutoFact: 60S ribosomal protein L2 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q9LLS6_TOBAC 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene76059 SustainPine v3.0 136
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 6.0e-17
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4.418e-28
Internal
sp_v3.0_unigene79283 SustainPine v3.0 308
• AutoFact: PREDICTED: ribosomal protein L8-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBCFE 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 7.824e-09
Internal
sp_v3.0_unigene99804 SustainPine v3.0 807
• AutoFact: Elongation factor P n=3 Tax=Andropogoneae RepID=B6TAH3_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene102191 SustainPine v3.0 505
• AutoFact: Ribosomal protein L2 n=1 Tax=Cycas taitungensis RepID=B0BLF2_CYCTA 0.0
• FL-Next: sp=60S ribosomal protein L2, mitochondrial; Oryza sativa subsp. japonica (Rice). Mitochondrion. 0.0
• Sma3: Ribosomal protein L2 7.631e-29
Internal
sp_v3.0_unigene126834 SustainPine v3.0 1274
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Misassembled
sp_v3.0_unigene126869 SustainPine v3.0 1245
• AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 7.71e-28
Misassembled
sp_v3.0_unigene127496 SustainPine v3.0 532
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 2.0e-27
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4.053e-27
Putative Complete
sp_v3.0_unigene129786 SustainPine v3.0 226
• AutoFact: plastid transcriptionally active 13 [Arabidopsis thaliana] gb|AAK83588.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AAM91077.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AEE74738.1| plastid transcriptionally active 13 [Arabidopsis thaliana] 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene131710 SustainPine v3.0 426
unknown
sp_v3.0_unigene143064 SustainPine v3.0 605
• AutoFact: 60S ribosomal protein L8-1 n=28 Tax=Spermatophyta RepID=RL81_ARATH 2.0e-31
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
• Sma3: 60S ribosomal protein L8 1.467e-08
Complete
sp_v3.0_unigene143172 SustainPine v3.0 825
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain