Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Uncharacterised protein family UPF0016

Term: IPR001727  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2616 SustainPine v3.0 669
AutoFact: [S] COG2119 Predicted membrane protein 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_132, whole genome shotgun sequence 0.0
C-terminus
sp_v3.0_unigene3419 SustainPine v3.0 2493
AutoFact: NUC153 multi-domain protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5210 SustainPine v3.0 372
AutoFact: transmembrane protein, putative [Arabidopsis thaliana] 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transmembrane protein 1.62e-11
Internal
sp_v3.0_unigene13275 SustainPine v3.0 859
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transmembrane protein 1.779e-11
N-terminus
sp_v3.0_unigene17283 SustainPine v3.0 1630
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30812 SustainPine v3.0 2494
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33374 SustainPine v3.0 932
AutoFact: UPF0016 domain containing protein 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted membrane protein 7.946e-08
N-terminus
sp_v3.0_unigene37075 SustainPine v3.0 860
AutoFact: Predicted membrane protein n=4 Tax=Malpighiales RepID=B9HWL1_POPTR 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted membrane protein 1.709e-14
C-terminus
sp_v3.0_unigene37381 SustainPine v3.0 1610
AutoFact: [S] COG2119 Predicted membrane protein 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted membrane protein 5.299e-11
Complete
sp_v3.0_unigene37570 SustainPine v3.0 1579
AutoFact: Transmembrane protein TPARL, putative n=1 Tax=Ricinus communis RepID=B9RWP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene47100 SustainPine v3.0 133
AutoFact: Predicted membrane protein n=1 Tax=Populus trichocarpa RepID=B9GX41_POPTR 2.0e-10
FL-Next: sp=GDT1-like protein 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene60011 SustainPine v3.0 401
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene60281 SustainPine v3.0 171
AutoFact: UPF0016 domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F22C12.9 8.285e-06
C-terminus
sp_v3.0_unigene69482 SustainPine v3.0 188
AutoFact: UPF0016 domain containing protein 2.0e-06
FL-Next: sp=GDT1-like protein 1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene72931 SustainPine v3.0 201
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transmembrane protein PFT27 1.676e-09
C-terminus
sp_v3.0_unigene132594 SustainPine v3.0 278
AutoFact: [S] COG2119 Predicted membrane protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted membrane protein 2.577e-11
Internal
sp_v3.0_unigene135409 SustainPine v3.0 276
AutoFact: PPR domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.424e-27
Internal
sp_v3.0_unigene148552 SustainPine v3.0 477
AutoFact: pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza sativa Japonica Group] dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza sativa Japonica Group] 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.472e-35
Putative N-terminus
sp_v3.0_unigene150961 SustainPine v3.0 497
AutoFact: PREDICTED: similar to Transmembrane protein 165 n=1 Tax=Hydra magnipapillata RepID=UPI000192552D 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151257 SustainPine v3.0 433
AutoFact: Transmembrane protein TPARL, putative n=1 Tax=Ectocarpus siliculosus RepID=D7FN76_ECTSI 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted membrane protein 1.724e-07
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain