Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Calycin

Term: IPR012674  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6459 SustainPine v3.0 1046
AutoFact: violaxanthin de-epoxidase [Zingiber officinale] 0.0
FL-Next: sp=Violaxanthin de-epoxidase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Violaxanthin de-epoxidase 1.4013e-45
C-terminus
sp_v3.0_unigene7685 SustainPine v3.0 1273
AutoFact: Chloroplast lipocalin n=2 Tax=Andropogoneae RepID=Q38JB7_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17164 SustainPine v3.0 1173
AutoFact: Temperature-induced lipocalin n=1 Tax=Pinus taeda RepID=Q38JD0_PINTA 0.0
FL-Next: tr=Temperature-induced lipocalin; Pinus taeda (Loblolly pine). 0.0
Sma3: Temperature-induced lipocalin 0.0
Complete
sp_v3.0_unigene29865 SustainPine v3.0 1099
AutoFact: Temperature-induced lipocalin n=1 Tax=Pinus taeda RepID=Q38JD0_PINTA 0.0
FL-Next: tr=Temperature-induced lipocalin; Pinus taeda (Loblolly pine). 0.0
Sma3: Temperature-induced lipocalin 0.0
Complete
sp_v3.0_unigene44847 SustainPine v3.0 478
AutoFact: pfam12854, PPR_1, PPR repeat 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.919e-06
Putative C-terminus
sp_v3.0_unigene48466 SustainPine v3.0 400
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630 gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana] gb|AEC08707.1| pentatricop 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene50637 SustainPine v3.0 416
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; Flags: Precursor gb|AAF78482.1|AC012187_2 Contains similarity to an unknown prot 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53089 SustainPine v3.0 323
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745 dbj|BAB11377.1| unnamed protein product [Arabidopsi 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene53472 SustainPine v3.0 467
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61990, mitochondrial; Flags: Precursor dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54011 SustainPine v3.0 187
AutoFact: Temperature-induced lipocalin n=1 Tax=Pinus taeda RepID=Q38JD0_PINTA 2.0e-20
FL-Next: tr=Temperature-induced lipocalin; Pinus taeda (Loblolly pine). 0.0
Sma3: Temperature-induced lipocalin 1.4013e-45
Putative N-terminus
sp_v3.0_unigene56630 SustainPine v3.0 230
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560 dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana] dbj|BAF00601.1| hypothetical prot 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein At5g65560 7.31e-06
Internal
sp_v3.0_unigene61847 SustainPine v3.0 345
AutoFact: Violaxanthin de-epoxidase n=1 Tax=Camellia sinensis RepID=Q8S4C2_CAMSI 1.0e-29
FL-Next: sp=Violaxanthin de-epoxidase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Violaxanthin de-epoxidase 3.497e-34
Internal
sp_v3.0_unigene127215 SustainPine v3.0 1030
AutoFact: Temperature-induced lipocalin n=1 Tax=Pinus taeda RepID=Q38JD0_PINTA 0.0
FL-Next: tr=Temperature-induced lipocalin; Pinus taeda (Loblolly pine). 0.0
Sma3: Temperature-induced lipocalin 0.0
Complete
sp_v3.0_unigene143675 SustainPine v3.0 479
AutoFact: Temperature-induced lipocalin n=1 Tax=Pinus taeda RepID=Q38JD0_PINTA 5.99756e-43
FL-Next: tr=Temperature-induced lipocalin; Pinus taeda (Loblolly pine). 0.0
Sma3: Temperature-induced lipocalin 9.157e-35
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain