Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange

Term: IPR014038  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4533 SustainPine v3.0 1327
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.721e-14
Complete
sp_v3.0_unigene17029 SustainPine v3.0 1558
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17316 SustainPine v3.0 1346
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.721e-14
Complete
sp_v3.0_unigene29456 SustainPine v3.0 1289
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30737 SustainPine v3.0 727
• AutoFact: Elongation factor 1-beta', putative n=1 Tax=Pediculus humanus corporis RepID=E0VE53_PEDHC 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 1.718e-14
Complete
sp_v3.0_unigene30893 SustainPine v3.0 698
• AutoFact: PREDICTED: similar to translation elongation factor 1B delta 2 subunit isoform 2 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4641F 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene30993 SustainPine v3.0 529
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 3.487e-11
N-terminus
sp_v3.0_unigene53835 SustainPine v3.0 340
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene57683 SustainPine v3.0 477
• AutoFact: Elongation factor 1-beta n=2 Tax=Sclerotiniaceae RepID=A7EN12_SCLS1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-beta 9.384e-16
Internal
sp_v3.0_unigene59563 SustainPine v3.0 381
• AutoFact: Elongation factor 1-delta 1 n=4 Tax=Oryza sativa RepID=EF1D1_ORYSJ 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene59986 SustainPine v3.0 279
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene66360 SustainPine v3.0 255
• AutoFact: Putative elongation factor 1 beta n=1 Tax=Hordeum vulgare RepID=Q9M3U8_HORVU 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.645e-14
Internal
sp_v3.0_unigene70994 SustainPine v3.0 198
• AutoFact: Elongation factor-like protein n=3 Tax=Solanum RepID=Q3HVL1_SOLTU 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.198e-14
C-terminus
sp_v3.0_unigene76023 SustainPine v3.0 280
• AutoFact: Translational elongation factor 1 subunit Bbeta n=1 Tax=Pisum sativum RepID=Q6SZ89_PEA 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.619e-14
C-terminus
sp_v3.0_unigene76494 SustainPine v3.0 321
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 1.587e-11
N-terminus
sp_v3.0_unigene76572 SustainPine v3.0 347
• AutoFact: elongation factor 1 beta/delta chain [Coprinopsis cinerea okayama7#130] gb|EAU87784.1| elongation factor 1 beta/delta chain [Coprinopsis cinerea okayama7#130] 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 5.942e-15
C-terminus
sp_v3.0_unigene80865 SustainPine v3.0 259
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.473e-14
Putative C-terminus
sp_v3.0_unigene127557 SustainPine v3.0 1059
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene142357 SustainPine v3.0 679
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.133e-14
N-terminus
sp_v3.0_unigene143371 SustainPine v3.0 306
• AutoFact: RecName: Full=Elongation factor 1-delta; Short=EF-1-delta; AltName: Full=Elongation factor 1B-beta; AltName: Full=eEF-1B beta gb|AAB68395.1| elongation factor 1-beta [Pimpinella brachycarpa] 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 3.493e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain