Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor EF1B, beta/delta chains, conserved site

Term: IPR001326  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene143527 SustainPine v3.0 430
• AutoFact: Elongation factor 1-delta 1 n=4 Tax=Oryza sativa RepID=EF1D1_ORYSJ 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 8.728e-09
N-terminus
sp_v3.0_unigene144537 SustainPine v3.0 656
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.306e-15
N-terminus
sp_v3.0_unigene145043 SustainPine v3.0 390
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene150960 SustainPine v3.0 442
• AutoFact: putative elongation factor 1 beta' [Diaphorina citri] 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151190 SustainPine v3.0 317
• AutoFact: Elongation factor 1-delta n=1 Tax=Anoplopoma fimbria RepID=C3KI18_ANOFI 1.0e-31
• FL-Next: tr=Putative elongation factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Elongation factor 1-beta, putative 3.922e-09
Internal
sp_v3.0_unigene152420 SustainPine v3.0 484
• AutoFact: putative elongation factor 1 beta [Triatoma infestans] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 1.117e-11
Putative C-terminus
sp_v3.0_unigene153291 SustainPine v3.0 423
• AutoFact: Elongation factor 1-beta n=2 Tax=Leishmania mexicana MHOM/GT/2001/U1103 RepID=E9B4Q3_LEIME 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 4.14e-15
C-terminus
sp_v3.0_unigene153472 SustainPine v3.0 266
• AutoFact: Elongation factor 1-beta', putative n=1 Tax=Pediculus humanus corporis RepID=E0VE53_PEDHC 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene154244 SustainPine v3.0 516
• AutoFact: Elongation factor 1-beta n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE9_VERA1 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 1.629e-14
C-terminus
sp_v3.0_unigene154821 SustainPine v3.0 398
• AutoFact: similar to GenBank Accession Number AF103726 peptide elongation factor 1-beta in Gallus gallus [Schistosoma japonicum] emb|CAX76775.1| eukaryotic translation elongation factor 1 beta 2 [Schistosoma japonicum] emb|CAX76776.1| eukaryotic translation elongat 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.264e-14
Putative C-terminus
sp_v3.0_unigene154853 SustainPine v3.0 284
• AutoFact: similar to GenBank Accession Number AF103726 peptide elongation factor 1-beta in Gallus gallus [Schistosoma japonicum] emb|CAX76775.1| eukaryotic translation elongation factor 1 beta 2 [Schistosoma japonicum] emb|CAX76776.1| eukaryotic translation elongat 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.473e-14
Putative C-terminus
sp_v3.0_unigene154899 SustainPine v3.0 488
• AutoFact: similar to GenBank Accession Number AF103726 peptide elongation factor 1-beta in Gallus gallus [Schistosoma japonicum] emb|CAX76775.1| eukaryotic translation elongation factor 1 beta 2 [Schistosoma japonicum] emb|CAX76776.1| eukaryotic translation elongat 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.22e-14
C-terminus
sp_v3.0_unigene157994 SustainPine v3.0 410
• AutoFact: Elongation factor 1b n=1 Tax=Polysphondylium pallidum RepID=D3BEW0_POLPA 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.425e-14
C-terminus
sp_v3.0_unigene158901 SustainPine v3.0 531
• AutoFact: Elongation factor 1-beta n=4 Tax=Xenopus RepID=EF1B_XENTR 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.22e-14
Internal
sp_v3.0_unigene163389 SustainPine v3.0 347
• AutoFact: Translational elongation factor 1 subunit Bbeta n=1 Tax=Pisum sativum RepID=Q6SZ89_PEA 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.473e-14
Putative Complete
sp_v3.0_unigene184346 SustainPine v3.0 458
• AutoFact: Elongation factor 1-beta n=4 Tax=Culicini RepID=B8RIZ3_CULTA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.264e-14
C-terminus
sp_v3.0_unigene204900 SustainPine v3.0 289
• AutoFact: Translational elongation factor 1 subunit Bbeta n=1 Tax=Pisum sativum RepID=Q6SZ89_PEA 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206021 SustainPine v3.0 633
• AutoFact: PREDICTED: similar to translation elongation factor 1B delta 2 subunit isoform 2 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4641F 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain