Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribonuclease CAF1

Term: IPR006941  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene141722 SustainPine v3.0 202
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 7.0e-13
FL-Next: sp=Probable CCR4-associated factor 1 homolog 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: CCR4-NOT transcription complex subunit 7 3.922e-09
Internal
sp_v3.0_unigene145006 SustainPine v3.0 505
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLV6_ELAGV 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed maturation protein 5.137e-16
Internal
sp_v3.0_unigene145965 SustainPine v3.0 307
AutoFact: putative CCR4-NOT transcription complex subunit 7 [Oryza sativa Japonica Group] dbj|BAD19282.1| putative CCR4-NOT transcription complex subunit 7 [Oryza sativa Japonica Group] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ccr4-associated factor, putative 1.117e-11
Putative N-terminus
sp_v3.0_unigene149416 SustainPine v3.0 189
AutoFact: Poly(A)-specific ribonuclease PARN [Arabidopsis thaliana] sp|Q9LG26.2|PARN_ARATH RecName: Full=Poly(A)-specific ribonuclease PARN; AltName: Full=Polyadenylate-specific ribonuclease; Short=AtPARN; AltName: Full=Protein ABA hypersensitive germination 2 dbj| 5.0e-09
FL-Next: sp=Poly(A)-specific ribonuclease PARN; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene158417 SustainPine v3.0 173
AutoFact: polyA tail-shortening ribonuclease, probable [Ostreococcus lucimarinus CCE9901] gb|ABO94497.1| polyA tail-shortening ribonuclease, probable [Ostreococcus lucimarinus CCE9901] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CCR4-NOT transcription complex subunit 7 6.271e-09
Internal
sp_v3.0_unigene208534 SustainPine v3.0 827
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ccr4-associated factor, putative 6.357e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain