Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Alpha tubulin

Term: IPR002452  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene51462 SustainPine v3.0 331
AutoFact: Alpha-tubulin (Fragment) n=5 Tax=core eudicotyledons RepID=Q9SQ74_GOSHI 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene52907 SustainPine v3.0 350
AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.289e-10
Putative C-terminus
sp_v3.0_unigene56295 SustainPine v3.0 318
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAC98454.1| nodulin-like protein [Arabidopsis thaliana] gb|AAL14413.1| At2g28120/F24D13.9 [Arabidopsis thaliana] gb|AAL32615.1| nodulin-like protein [Arabidopsis thaliana] gb|AAM13326.1| nodulin-like pro 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nodulin family protein, putative, expressed 3.051e-17
Internal
sp_v3.0_unigene56507 SustainPine v3.0 313
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene57438 SustainPine v3.0 471
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.135e-28
N-terminus
sp_v3.0_unigene58365 SustainPine v3.0 409
AutoFact: Alpha tubulin (Fragment) n=9 Tax=Eukaryota RepID=Q5UMY4_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 9.459e-29
Putative Complete
sp_v3.0_unigene59358 SustainPine v3.0 263
AutoFact: tubulin alpha-3 chain [Oryza sativa Indica Group] 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 2.51e-16
Internal
sp_v3.0_unigene59450 SustainPine v3.0 316
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Zea mays RepID=Q9LKY5_MAIZE 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 9.002e-25
Internal
sp_v3.0_unigene61310 SustainPine v3.0 201
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 5.796e-14
Internal
sp_v3.0_unigene63576 SustainPine v3.0 293
AutoFact: proteasome subunit beta type-5-B [Arabidopsis thaliana] sp|Q9LIP2.1|PSB5B_ARATH RecName: Full=Proteasome subunit beta type-5-B; AltName: Full=20S proteasome beta subunit E-2; AltName: Full=Proteasome epsilon-2 chain; Flags: Precursor gb|AAL27514.1|AF43984 2.0e-40
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type 5 1.408e-08
Internal
sp_v3.0_unigene64955 SustainPine v3.0 274
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 5.792e-27
Internal
sp_v3.0_unigene65548 SustainPine v3.0 313
AutoFact: alpha tubulin-2A [Triticum aestivum] gb|ABD92931.1| alpha tubulin-2D [Triticum aestivum] gb|ABD92932.1| alpha tubulin-2B [Triticum aestivum] 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 2.675e-16
Internal
sp_v3.0_unigene74859 SustainPine v3.0 303
AutoFact: tubulin alpha-2/alpha-4 chain [Arabidopsis thaliana] 8.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.15e-26
N-terminus
sp_v3.0_unigene75575 SustainPine v3.0 253
AutoFact: Tubulin alpha-1A chain n=6 Tax=Agaricales RepID=TBAA_SCHCO 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 1.214e-35
Internal
sp_v3.0_unigene76692 SustainPine v3.0 279
AutoFact: Alpha tubulin n=4 Tax=Agaricales RepID=A8NWX6_COPC7 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.945e-29
Internal
sp_v3.0_unigene77368 SustainPine v3.0 200
AutoFact: Alpha-tubulin, putative n=2 Tax=Phytophthora infestans T30-4 RepID=D0N956_PHYIT 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78270 SustainPine v3.0 294
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 1.00053e-42
FL-Next: sp=Tubulin alpha-1 chain; Gossypium hirsutum (Upland cotton) (Gossypium mexicanum). 0.0
Sma3: Tubulin alpha-2 chain 1.377e-09
Internal
sp_v3.0_unigene79092 SustainPine v3.0 440
AutoFact: Alpha-tubulin n=1 Tax=Sterkiella histriomuscorum RepID=Q49I46_OXYTR 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin alpha-2 chain 2.42e-07
N-terminus
sp_v3.0_unigene79329 SustainPine v3.0 358
AutoFact: Alhpa-tubulin 3 n=1 Tax=Reticulomyxa filosa RepID=O44024_RETFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.342e-37
Internal
sp_v3.0_unigene79381 SustainPine v3.0 429
AutoFact: Tubulin alpha-1A chain n=6 Tax=Agaricales RepID=TBAA_SCHCO 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.735e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain