Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein 60S

Term: IPR001813  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene155938 SustainPine v3.0 442
AutoFact: Ubiquitin/40S ribosomal protein S27a fusion protein n=1 Tax=Argas monolakensis RepID=Q09JW5_ARGMO 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene156059 SustainPine v3.0 384
AutoFact: 60S acidic ribosomal protein P2 n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NFV7_AJECG 1.0e-07
Sma3: Acidic ribosomal protein 4.49e-09
coding
sp_v3.0_unigene156275 SustainPine v3.0 372
AutoFact: Chain A, Structure Of Ubiquitin-Like Protein, Rub1 1.0e-24
FL-Next: tr=Ubiquitin; Coccomyxa subellipsoidea C-169. 0.0
Sma3: Ubiquitin-related protein 3 2.689e-08
Complete
sp_v3.0_unigene156456 SustainPine v3.0 282
AutoFact: Ribosomal acidic phosphoprotein P1 n=1 Tax=Polysphondylium pallidum RepID=D3BDB6_POLPA 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene156927 SustainPine v3.0 352
AutoFact: 60S acidic ribosomal protein P0 n=3 Tax=Ajellomyces dermatitidis RepID=C5GCV5_AJEDR 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 8.379e-09
Putative N-terminus
sp_v3.0_unigene157514 SustainPine v3.0 251
AutoFact: Ribosomal protein, large P2 n=1 Tax=Danio rerio RepID=Q6PBJ9_DANRE 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene157848 SustainPine v3.0 462
AutoFact: 60S acidic ribosomal protein P0 n=14 Tax=Schizophora RepID=RLA0_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 3.156e-19
Internal
sp_v3.0_unigene158480 SustainPine v3.0 361
AutoFact: 60S acidic ribosomal protein P0 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NVM9_PHYIT 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 3.156e-19
Internal
sp_v3.0_unigene162132 SustainPine v3.0 410
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene164617 SustainPine v3.0 271
AutoFact: 60S acidic ribosomal protein P0-1 [Arabidopsis thaliana] sp|O04204.1|RLA01_ARATH RecName: Full=60S acidic ribosomal protein P0-1 gb|AAB95286.1| 60S acidic ribosomal protein P0 [Arabidopsis thaliana] gb|AAN71918.1| putative 60S acidic ribosomal protein P0 2.0e-09
FL-Next: sp=60S acidic ribosomal protein P0-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene166345 SustainPine v3.0 391
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P1 1.304e-10
N-terminus
sp_v3.0_unigene166765 SustainPine v3.0 265
AutoFact: Probable ubiquitin/ribosomal protein S27a fusion protein n=2 Tax=Ustilaginaceae RepID=E6ZP53_9BASI 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S27a 2.046e-06
Internal
sp_v3.0_unigene168837 SustainPine v3.0 445
AutoFact: Ribosomal_60s multi-domain protein 3.0e-17
coding
sp_v3.0_unigene169536 SustainPine v3.0 349
AutoFact: Ribosomal_60s multi-domain protein 1.0e-20
Sma3: Acidic ribosomal protein P2 7.797e-06
coding
sp_v3.0_unigene192071 SustainPine v3.0 437
AutoFact: 60S acidic ribosomal protein P0 n=1 Tax=Dictyostelium purpureum RepID=F0ZXE3_DICPU 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 2.941e-19
Internal
sp_v3.0_unigene193264 SustainPine v3.0 489
AutoFact: 60S acidic ribosomal protein P0 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NUM6_COPC7 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 3.156e-19
N-terminus
sp_v3.0_unigene200095 SustainPine v3.0 392
AutoFact: UPI0002068BB3 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0002068BB3 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 3.156e-19
Internal
sp_v3.0_unigene200559 SustainPine v3.0 363
AutoFact: 60S acidic ribosomal protein P0 n=9 Tax=Endopterygota RepID=E2AZT8_9HYME 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 5.172e-08
Putative N-terminus
sp_v3.0_unigene204906 SustainPine v3.0 363
AutoFact: 60s acidic ribosomal protein [Prunus dulcis] gb|ABH03379.1| 60S acidic ribosomal protein [Prunus dulcis] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P2, putative 1.6e-12
N-terminus
sp_v3.0_unigene205691 SustainPine v3.0 508
AutoFact: 60S acidic ribosomal protein P0 n=6 Tax=Andropogoneae RepID=RLA0_MAIZE 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 4.82e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain