Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Coatomer, epsilon subunit

Term: IPR006822  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3063 SustainPine v3.0 2734
AutoFact: Chloride channel protein n=1 Tax=Citrus trifoliata RepID=D5LM39_PONTR 0.0
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cl-channel clc-7 7.165e-20
Complete
sp_v3.0_unigene3723 SustainPine v3.0 3267
AutoFact: Cl-channel clc-7 n=2 Tax=Populus trichocarpa RepID=B9N0H5_POPTR 0.0
FL-Next: sp=Putative chloride channel-like protein CLC-g; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cl-channel clc-7 7.488e-20
Complete
sp_v3.0_unigene14921 SustainPine v3.0 1851
AutoFact: coatomer-like protein, epsilon subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene28617 SustainPine v3.0 3241
AutoFact: Cl-channel clc-7 n=2 Tax=Populus trichocarpa RepID=B9N0H5_POPTR 0.0
FL-Next: sp=Putative chloride channel-like protein CLC-g; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cl-channel clc-7 7.488e-20
Complete
sp_v3.0_unigene131725 SustainPine v3.0 380
AutoFact: Coatomer epsilon subunit, putative n=1 Tax=Ricinus communis RepID=B9SV80_RICCO 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Epsilon1-COP 8.439e-09
N-terminus
sp_v3.0_unigene142836 SustainPine v3.0 348
AutoFact: Coatomer subunit epsilon-1 n=7 Tax=Poaceae RepID=COPE1_ORYSJ 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Epsilon1-COP 1.501e-09
Misassembled
sp_v3.0_unigene144868 SustainPine v3.0 560
AutoFact: coatomer subunit epsilon-1 [Arabidopsis thaliana] sp|Q9SA78.1|COPE1_ARATH RecName: Full=Coatomer subunit epsilon-1; AltName: Full=Epsilon-coat protein 1; Short=Epsilon-COP 1 gb|AAD25750.1|AC007060_8 Strong similarity to F19I3.7 gi|3033380 putative coatome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Epsilon1-COP 1.351e-08
Putative N-terminus
sp_v3.0_unigene148134 SustainPine v3.0 129
AutoFact: Chloride channel ClC3 n=2 Tax=Vitis vinifera RepID=E2GMA3_VITVI 3.0e-09
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cl-channel clc-7 5.045e-14
C-terminus
sp_v3.0_unigene153503 SustainPine v3.0 460
AutoFact: Vesicle coat complex COPI, epsilon subunit, putative n=1 Tax=Ixodes scapularis RepID=B7QH49_IXOSC 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Epsilon-cop 4.386e-06
Internal
sp_v3.0_unigene154612 SustainPine v3.0 392
AutoFact: Coatomer subunit epsilon n=2 Tax=Myrmicinae RepID=F4WP22_9HYME 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain