Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: NLI interacting factor

Term: IPR004274  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1794 SustainPine v3.0 901
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Senescence-associated-like protein 1.093e-08
Internal
sp_v3.0_unigene2522 SustainPine v3.0 2041
AutoFact: NIF domain containing protein 7.0e-16
FL-Next: tr=36I5.7; Oryza sativa subsp. japonica (Rice). 0.0
Putative Complete
sp_v3.0_unigene2524 SustainPine v3.0 1821
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] emb|CAB87850.1| putative protein [Arabidopsis thaliana] gb|AAM20657.1| putative protein [Arabidopsis thaliana] gb|AAM61626.1| unknown [Arabidopsis thaliana] gb|AAN15623. 0.0
FL-Next: tr=CTD small phosphatase-like protein; Zea mays (Maize). 0.0
Sma3: CTD small phosphatase-like protein 1.945e-09
Complete
sp_v3.0_unigene2984 SustainPine v3.0 2676
AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative nuclear LIM factor interactor-interacting protein cleavage-specific form 2.695e-08
Complete
sp_v3.0_unigene3286 SustainPine v3.0 1751
AutoFact: NIF domain containing protein 2.0e-15
FL-Next: tr=36I5.7; Oryza sativa subsp. japonica (Rice). 0.0
Putative Complete
sp_v3.0_unigene4007 SustainPine v3.0 1829
AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 6.0e-16
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA polymerase II ctd phosphatase, putative 2.807e-08
C-terminus
sp_v3.0_unigene4854 SustainPine v3.0 261
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4; 5.0e-19
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene5531 SustainPine v3.0 3433
AutoFact: NIF domain containing protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein 170F8.6; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Complete
sp_v3.0_unigene5874 SustainPine v3.0 2249
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene5889 SustainPine v3.0 1221
AutoFact: Zinc ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9RR35_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Senescence-associated-like protein 1.165e-08
C-terminus
sp_v3.0_unigene7201 SustainPine v3.0 2262
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4; 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA polymerase II ctd phosphatase, putative 2.95e-08
C-terminus
sp_v3.0_unigene11710 SustainPine v3.0 2016
AutoFact: mitochondrial import inner membrane translocase subunit TIM50 [Arabidopsis thaliana] sp|Q8VYE2.1|TIM50_ARATH RecName: Full=Mitochondrial import inner membrane translocase subunit TIM50; AltName: Full=Protein EMBRYO DEFECTIVE 1860; Flags: Precursor gb|AAL5 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Mitochondrial inner membrane preprotein translocase (TIM23) component-related 2.076e-09
Complete
sp_v3.0_unigene11840 SustainPine v3.0 2256
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Senescence-associated-like protein 1.295e-08
Complete
sp_v3.0_unigene12345 SustainPine v3.0 1720
AutoFact: ubiquitin-like domain-containing CTD phosphatase [Arabidopsis thaliana] sp|Q8W3M6.1|UBCP_ARATH RecName: Full=Ubiquitin-like domain-containing CTD phosphatase dbj|BAB83612.1| unknown protein [Arabidopsis thaliana] gb|AEE82552.1| ubiquitin-like domain-conta 0.0
FL-Next: sp=Ubiquitin-like domain-containing CTD phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12499 SustainPine v3.0 1163
AutoFact: Zinc ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9RR35_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Senescence-associated-like protein 1.165e-08
C-terminus
sp_v3.0_unigene14287 SustainPine v3.0 1978
AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene14680 SustainPine v3.0 234
AutoFact: FAP multi-domain protein 1.0e-10
Sma3: Putative glycine-rich cell wall structural protein 1.383e-10
unknown
sp_v3.0_unigene24555 SustainPine v3.0 346
AutoFact: Dullard-like phosphatase domain containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q6P2_9MYCE 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene28775 SustainPine v3.0 926
AutoFact: Carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase n=1 Tax=Cucumis melo subsp. melo RepID=E5GC25_CUCME 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative nuclear LIM factor interactor-interacting protein cleavage-specific form 1.854e-13
Putative C-terminus
sp_v3.0_unigene35097 SustainPine v3.0 1469
AutoFact: Zinc finger family protein n=3 Tax=Arabidopsis RepID=D7LM87_ARALL 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Senescence-associated-like protein 1.062e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain