Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L13, bacterial-type

Term: IPR005823  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3526 SustainPine v3.0 2395
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transmembrane 9 superfamily protein member 1 1.744e-11
Complete
sp_v3.0_unigene11960 SustainPine v3.0 1163
AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18664 SustainPine v3.0 857
AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative ribosomal protein I 5.028e-09
Putative Complete
sp_v3.0_unigene23361 SustainPine v3.0 1511
AutoFact: 50S ribosomal protein L13, putative n=1 Tax=Ricinus communis RepID=B9T1K1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25453 SustainPine v3.0 3616
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 7.252e-40
Complete
sp_v3.0_unigene30558 SustainPine v3.0 1259
AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34782 SustainPine v3.0 890
AutoFact: putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EMP/nonaspanin domain family protein 1.796e-15
Internal
sp_v3.0_unigene37119 SustainPine v3.0 541
AutoFact: putative ribosomal protein I [Oryza sativa Japonica Group] 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative ribosomal protein I 4.107e-09
N-terminus
sp_v3.0_unigene42398 SustainPine v3.0 1306
AutoFact: large subunit ribosomal protein L13 [Arabidopsis thaliana] ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana] gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana] dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73714. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene68525 SustainPine v3.0 152
AutoFact: putative ribosomal protein I [Oryza sativa Japonica Group] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative ribosomal protein I 2.796e-09
Putative N-terminus
sp_v3.0_unigene75634 SustainPine v3.0 224
AutoFact: Plastid/chloroplast ribosomal protein L13 n=1 Tax=Volvox carteri f. nagariensis RepID=D8THU4_VOLCA 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CL13 4.296e-09
Internal
sp_v3.0_unigene133792 SustainPine v3.0 623
AutoFact: EMP70 multi-domain protein 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transmembrane 9 superfamily protein member 1 8.983e-12
C-terminus
sp_v3.0_unigene137596 SustainPine v3.0 418
AutoFact: EMP70 domain containing protein 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transporter, putative 3.983e-09
Internal
sp_v3.0_unigene142941 SustainPine v3.0 398
AutoFact: 50S ribosomal protein L13 n=3 Tax=Zea mays RepID=B6TBC7_MAIZE 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative ribosomal protein I 2.447e-09
N-terminus
sp_v3.0_unigene150173 SustainPine v3.0 452
AutoFact: 50S ribosomal protein L13 n=1 Tax=Opitutus terrae PB90-1 RepID=RL13_OPITP 0.0
FL-Next: sp=50S ribosomal protein L13, chloroplastic; Porphyra purpurea. Plastid; Chloroplast. 0.0
Sma3: 50S ribosomal protein L13 6.545e-08
Complete
sp_v3.0_unigene150290 SustainPine v3.0 436
AutoFact: 50S ribosomal protein L13 n=3 Tax=Rhodocyclaceae RepID=RL13_AROAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L13, chloroplastic 3.556e-19
Internal
sp_v3.0_unigene151566 SustainPine v3.0 466
AutoFact: 50S ribosomal protein L13 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PK37_CHIPD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L13, chloroplastic 3.183e-19
Internal
sp_v3.0_unigene157158 SustainPine v3.0 427
AutoFact: Ribosomal protein L13 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=F2JSF7_CELLD 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene157343 SustainPine v3.0 235
AutoFact: 50S ribosomal protein L13 n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N5J8_9FIRM 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L13, chloroplastic 1.591e-15
Internal
sp_v3.0_unigene166889 SustainPine v3.0 173
AutoFact: putative multispanning membrane protein [Populus tremula x Populus alba] 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transmembrane 9 superfamily protein member 1 1.76e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain