Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Serine hydroxymethyltransferase

Term: IPR001085  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene54565 SustainPine v3.0 195
AutoFact: BZip protein AtbZip21 n=3 Tax=Arabidopsis thaliana RepID=Q0WT94_ARATH 4.0e-16
FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
Sma3: BZIP transcription factor 9.59e-22
Internal
sp_v3.0_unigene59448 SustainPine v3.0 277
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 3.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 2.254e-12
Internal
sp_v3.0_unigene60048 SustainPine v3.0 385
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 4.0e-29
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene62081 SustainPine v3.0 269
AutoFact: Transcription factor HBP-1b(C1), putative n=1 Tax=Ricinus communis RepID=B9T2C4_RICCO 2.0e-22
FL-Next: Isoform 2 of Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 0.0
Sma3: BZIP transcription factor 9.735e-22
Putative N-terminus
sp_v3.0_unigene63481 SustainPine v3.0 149
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Drosophila RepID=B4MEL9_DROVI 6.0e-17
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene63504 SustainPine v3.0 173
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 4.0e-24
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 8.308e-08
C-terminus
sp_v3.0_unigene68326 SustainPine v3.0 346
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 2.0e-12
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 3.979e-15
Internal
sp_v3.0_unigene70179 SustainPine v3.0 261
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 8.603e-08
Internal
sp_v3.0_unigene70660 SustainPine v3.0 492
AutoFact: Serine hydroxymethyltransferase n=9 Tax=Poaceae RepID=Q7Y1F0_ORYSJ 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene75213 SustainPine v3.0 372
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 2.0e-38
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Misassembled
sp_v3.0_unigene93866 SustainPine v3.0 779
AutoFact: MADS-box transcription factor GbMADS5 n=1 Tax=Ginkgo biloba RepID=Q58A78_GINBI 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 1.881e-11
N-terminus
sp_v3.0_unigene97078 SustainPine v3.0 853
AutoFact: putative phosphatidylinositol 3,5-kinase [Oryza sativa Japonica Group] gb|ABF96451.1| phosphatidylinositol-4-phosphate 5-kinase family protein, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 8.885e-12
N-terminus
sp_v3.0_unigene102017 SustainPine v3.0 509
AutoFact: Adenine nucleotide alpha hydrolase domain-containing protein kinase n=3 Tax=Arabidopsis RepID=Q1PF03_ARATH 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 1.003e-15
N-terminus
sp_v3.0_unigene105721 SustainPine v3.0 197
AutoFact: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Oryza sativa Japonica Group] 4.0e-26
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 6.221e-08
Internal
sp_v3.0_unigene119714 SustainPine v3.0 491
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 2.0e-25
FL-Next: tr=MADS3 protein; Thujopsis dolabrata (Hiba arborvitae) (Platycladus dolabrata). 0.0
Sma3: MADS box transcription factor 7.062e-19
N-terminus
sp_v3.0_unigene120208 SustainPine v3.0 125
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 4.0e-12
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 1.102e-06
Internal
sp_v3.0_unigene127856 SustainPine v3.0 1763
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene129374 SustainPine v3.0 434
AutoFact: BZIP domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIQ7_MALDO 9.0e-19
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Sma3: BZIP transcription factor 3.163e-19
Putative N-terminus
sp_v3.0_unigene129557 SustainPine v3.0 976
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box transcription factor 2.167e-20
Complete
sp_v3.0_unigene140616 SustainPine v3.0 731
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain