Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Chlorophyll A-B binding protein, plant

Term: IPR001344  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene143667 SustainPine v3.0 184
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 4.0e-18
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 9.277e-22
Internal
sp_v3.0_unigene143730 SustainPine v3.0 973
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 2.527e-26
Complete
sp_v3.0_unigene143910 SustainPine v3.0 437
AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-1,4-glucan-protein synthase [UDP-forming], putative 1.014e-14
C-terminus
sp_v3.0_unigene143948 SustainPine v3.0 463
AutoFact: Putative early light-induced protein (Fragment) n=1 Tax=Cupressus sempervirens RepID=B6V6N2_9CONI 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ELIP 2.459e-21
C-terminus
sp_v3.0_unigene144373 SustainPine v3.0 663
AutoFact: chlorophyll a/b-binding protein CP26 precursor - maize [Oryza sativa Japonica Group] gb|ABA92340.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Chlorophyll a-b binding protein of LHCII 7.348e-14
Putative N-terminus
sp_v3.0_unigene144418 SustainPine v3.0 415
AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-1,4-glucan-protein synthase [UDP-forming], putative 1.024e-14
C-terminus
sp_v3.0_unigene144475 SustainPine v3.0 350
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 5.494e-16
N-terminus
sp_v3.0_unigene144632 SustainPine v3.0 565
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.392e-16
Putative Complete
sp_v3.0_unigene144963 SustainPine v3.0 390
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 6.163e-31
Internal
sp_v3.0_unigene146065 SustainPine v3.0 395
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-21
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 2.157e-19
Misassembled
sp_v3.0_unigene146175 SustainPine v3.0 428
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 3.183e-19
N-terminus
sp_v3.0_unigene146252 SustainPine v3.0 388
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 5.239e-17
N-terminus
sp_v3.0_unigene146255 SustainPine v3.0 290
AutoFact: Type I chlorophyll a/b-binding protein b (Fragment) n=10 Tax=core eudicotyledons RepID=Q9AVF0_AMATR 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.489e-16
N-terminus
sp_v3.0_unigene146256 SustainPine v3.0 540
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.041e-28
N-terminus
sp_v3.0_unigene146267 SustainPine v3.0 349
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-19
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 2.742e-16
N-terminus
sp_v3.0_unigene146276 SustainPine v3.0 627
AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.021e-26
Putative Complete
sp_v3.0_unigene146304 SustainPine v3.0 764
AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.755e-29
Complete
sp_v3.0_unigene146308 SustainPine v3.0 507
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 7.9874e-44
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: LHCP 1.342e-26
Putative Complete
sp_v3.0_unigene146332 SustainPine v3.0 429
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.708e-29
C-terminus
sp_v3.0_unigene146336 SustainPine v3.0 571
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.392e-16
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain