Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene80176
|
SustainPine v3.0
|
235
|
• AutoFact: Chloroplast light-harvesting complex I protein Lhca9 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ7_ACEAT
|
5.0e-17
|
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).
|
0.0
|
|
Internal
|
sp_v3.0_unigene80417
|
SustainPine v3.0
|
347
|
• AutoFact: Succinyl-CoA synthetase alpha subunit, putative n=3 Tax=Trichocomaceae RepID=B6QGB0_PENMQ
|
1.99993e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene80558
|
SustainPine v3.0
|
215
|
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI
|
3.0e-33
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: LHCP
|
1.618e-21
|
|
Putative C-terminus
|
sp_v3.0_unigene80649
|
SustainPine v3.0
|
400
|
• AutoFact: Chlorophyll a-b binding protein, chloroplastic n=16 Tax=Physcomitrella patens RepID=CB2_PHYPA
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: LHCP
|
6.823e-21
|
|
Internal
|
sp_v3.0_unigene80694
|
SustainPine v3.0
|
193
|
• AutoFact: chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
|
1.0e-20
|
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).
|
0.0
|
• Sma3: LHCP
|
1.191e-18
|
|
Internal
|
sp_v3.0_unigene80829
|
SustainPine v3.0
|
329
|
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY
|
6.0e-40
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Chloroplast chlorophyll A-B binding protein 40
|
2.26e-08
|
|
Complete
|
sp_v3.0_unigene81134
|
SustainPine v3.0
|
271
|
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY
|
4.0e-08
|
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine).
|
0.0
|
|
N-terminus
|
sp_v3.0_unigene81681
|
SustainPine v3.0
|
408
|
• AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=2 Tax=core eudicotyledons RepID=CB24_SOLLC
|
3.0e-29
|
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).
|
0.0
|
• Sma3: LHCP
|
3.328e-14
|
|
Internal
|
sp_v3.0_unigene93859
|
SustainPine v3.0
|
1246
|
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Putative uncharacterized protein
|
0.0
|
|
Complete
|
sp_v3.0_unigene99959
|
SustainPine v3.0
|
1129
|
• AutoFact: DNAJ heat shock protein-like protein [Arabidopsis thaliana] gb|AAD25656.1| putative heat shock protein [Arabidopsis thaliana] gb|AAL09794.1| At2g20560/T13C7.15 [Arabidopsis thaliana] gb|AAM63509.1| putative heat shock protein [Arabidopsis thaliana] gb|AAM
|
3.0e-17
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Protein SIS1, putative
|
3.077e-11
|
|
N-terminus
|
sp_v3.0_unigene101904
|
SustainPine v3.0
|
523
|
• AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO
|
0.0
|
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).
|
0.0
|
• Sma3: LHCP
|
1.445e-38
|
|
Internal
|
sp_v3.0_unigene112378
|
SustainPine v3.0
|
485
|
• AutoFact: pfam00504, Chloroa_b-bind, Chlorophyll A-B binding protein
|
6.0e-16
|
• FL-Next: sp=Chlorophyll a-b binding protein L1818, chloroplastic; Chlamydomonas moewusii (Chlamydomonas eugametos).
|
0.0
|
|
Putative N-terminus
|
sp_v3.0_unigene117026
|
SustainPine v3.0
|
518
|
• AutoFact: Light-harvesting complex n=2 Tax=Selaginella moellendorffii RepID=D8RZ61_SELML
|
8.0e-08
|
• FL-Next: tr=Light-harvesting complex; Selaginella moellendorffii (Spikemoss).
|
0.0
|
|
Putative C-terminus
|
sp_v3.0_unigene119095
|
SustainPine v3.0
|
509
|
• AutoFact: stress-related chlorophyll a/b binding protein 1 [Chlamydomonas reinhardtii] emb|CAA64632.1| LI818r-1 [Chlamydomonas reinhardtii] gb|EDP01074.1| stress-related chlorophyll a/b binding protein 1 [Chlamydomonas reinhardtii]
|
2.0e-34
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Protein fucoxanthin chlorophyll a/c protein
|
9.099e-13
|
|
C-terminus
|
sp_v3.0_unigene120281
|
SustainPine v3.0
|
320
|
• AutoFact: Chloroplast light-harvesting chlorophyll-a/b binding protein n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y3_9CHLO
|
5.0e-19
|
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).
|
0.0
|
• Sma3: LHCP
|
0.0
|
|
N-terminus
|
sp_v3.0_unigene120304
|
SustainPine v3.0
|
310
|
• AutoFact: Light-harvesting protein of photosystem I n=1 Tax=Chlamydomonas reinhardtii RepID=A8IKC8_CHLRE
|
3.0e-17
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene126645
|
SustainPine v3.0
|
1684
|
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH
|
0.0
|
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).
|
0.0
|
• Sma3: Chlorophyll a/b-binding protein
|
0.0
|
|
Misassembled
|
sp_v3.0_unigene126720
|
SustainPine v3.0
|
1224
|
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH
|
0.0
|
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).
|
0.0
|
• Sma3: Chlorophyll a/b-binding protein
|
0.0
|
|
Complete
|
sp_v3.0_unigene127011
|
SustainPine v3.0
|
820
|
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: LHCP
|
4.278e-31
|
|
Complete
|
sp_v3.0_unigene127156
|
SustainPine v3.0
|
1214
|
• AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Chlorophyll A/B binding protein, putative
|
5.512e-17
|
|
Complete
|