Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chlorophyll A-B binding protein, plant

Term: IPR001344  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene80176 SustainPine v3.0 235
AutoFact: Chloroplast light-harvesting complex I protein Lhca9 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ7_ACEAT 5.0e-17
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Internal
sp_v3.0_unigene80417 SustainPine v3.0 347
AutoFact: Succinyl-CoA synthetase alpha subunit, putative n=3 Tax=Trichocomaceae RepID=B6QGB0_PENMQ 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80558 SustainPine v3.0 215
AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.618e-21
Putative C-terminus
sp_v3.0_unigene80649 SustainPine v3.0 400
AutoFact: Chlorophyll a-b binding protein, chloroplastic n=16 Tax=Physcomitrella patens RepID=CB2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 6.823e-21
Internal
sp_v3.0_unigene80694 SustainPine v3.0 193
AutoFact: chlorophyll a/b-binding protein [Mesembryanthemum crystallinum] 1.0e-20
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.191e-18
Internal
sp_v3.0_unigene80829 SustainPine v3.0 329
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 6.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplast chlorophyll A-B binding protein 40 2.26e-08
Complete
sp_v3.0_unigene81134 SustainPine v3.0 271
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 4.0e-08
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
N-terminus
sp_v3.0_unigene81681 SustainPine v3.0 408
AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=2 Tax=core eudicotyledons RepID=CB24_SOLLC 3.0e-29
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 3.328e-14
Internal
sp_v3.0_unigene93859 SustainPine v3.0 1246
AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene99959 SustainPine v3.0 1129
AutoFact: DNAJ heat shock protein-like protein [Arabidopsis thaliana] gb|AAD25656.1| putative heat shock protein [Arabidopsis thaliana] gb|AAL09794.1| At2g20560/T13C7.15 [Arabidopsis thaliana] gb|AAM63509.1| putative heat shock protein [Arabidopsis thaliana] gb|AAM 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SIS1, putative 3.077e-11
N-terminus
sp_v3.0_unigene101904 SustainPine v3.0 523
AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.445e-38
Internal
sp_v3.0_unigene112378 SustainPine v3.0 485
AutoFact: pfam00504, Chloroa_b-bind, Chlorophyll A-B binding protein 6.0e-16
FL-Next: sp=Chlorophyll a-b binding protein L1818, chloroplastic; Chlamydomonas moewusii (Chlamydomonas eugametos). 0.0
Putative N-terminus
sp_v3.0_unigene117026 SustainPine v3.0 518
AutoFact: Light-harvesting complex n=2 Tax=Selaginella moellendorffii RepID=D8RZ61_SELML 8.0e-08
FL-Next: tr=Light-harvesting complex; Selaginella moellendorffii (Spikemoss). 0.0
Putative C-terminus
sp_v3.0_unigene119095 SustainPine v3.0 509
AutoFact: stress-related chlorophyll a/b binding protein 1 [Chlamydomonas reinhardtii] emb|CAA64632.1| LI818r-1 [Chlamydomonas reinhardtii] gb|EDP01074.1| stress-related chlorophyll a/b binding protein 1 [Chlamydomonas reinhardtii] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein fucoxanthin chlorophyll a/c protein 9.099e-13
C-terminus
sp_v3.0_unigene120281 SustainPine v3.0 320
AutoFact: Chloroplast light-harvesting chlorophyll-a/b binding protein n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y3_9CHLO 5.0e-19
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 0.0
N-terminus
sp_v3.0_unigene120304 SustainPine v3.0 310
AutoFact: Light-harvesting protein of photosystem I n=1 Tax=Chlamydomonas reinhardtii RepID=A8IKC8_CHLRE 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene126645 SustainPine v3.0 1684
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Chlorophyll a/b-binding protein 0.0
Misassembled
sp_v3.0_unigene126720 SustainPine v3.0 1224
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Chlorophyll a/b-binding protein 0.0
Complete
sp_v3.0_unigene127011 SustainPine v3.0 820
AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 4.278e-31
Complete
sp_v3.0_unigene127156 SustainPine v3.0 1214
AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chlorophyll A/B binding protein, putative 5.512e-17
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain