Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chlorophyll A-B binding protein, plant

Term: IPR001344  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene73489 SustainPine v3.0 450
• AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 1.0e-22
• FL-Next: tr=Type II chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene73700 SustainPine v3.0 397
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.242e-29
C-terminus
sp_v3.0_unigene73878 SustainPine v3.0 404
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 2.0e-39
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 7.457e-27
Putative C-terminus
sp_v3.0_unigene73942 SustainPine v3.0 438
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 4.655e-24
Putative Complete
sp_v3.0_unigene74194 SustainPine v3.0 289
• AutoFact: chloroplast chlorophyll a/b binding protein [Pachysandra terminalis] 1.0e-38
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.736e-21
Internal
sp_v3.0_unigene74263 SustainPine v3.0 471
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 9.99995e-41
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.743e-16
Putative Complete
sp_v3.0_unigene74654 SustainPine v3.0 382
• AutoFact: Chlorophyll a/b-binding protein, photosystem II (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q14K89_PLAAC 8.00001e-41
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1B, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 1.726e-26
Putative C-terminus
sp_v3.0_unigene75018 SustainPine v3.0 231
• AutoFact: Type I chlorophyll a/b-binding protein b (Fragment) n=10 Tax=core eudicotyledons RepID=Q9AVF0_AMATR 1.0e-32
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.573e-21
Internal
sp_v3.0_unigene75558 SustainPine v3.0 273
• AutoFact: Early light-induced protein, putative n=1 Tax=Ricinus communis RepID=B9RTJ9_RICCO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Early light inducible protein 3.048e-13
C-terminus
sp_v3.0_unigene76141 SustainPine v3.0 226
• AutoFact: Chaperone protein DnaJ n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLU9_DESAH 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein SIS1, putative 1.325e-10
Internal
sp_v3.0_unigene76295 SustainPine v3.0 154
• AutoFact: Light-harvesting chlorphyll binding protein 3 (Fragment) n=1 Tax=Solenostemon scutellarioides RepID=C9VWR2_SOLSC 3.0e-16
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.249e-13
Putative C-terminus
sp_v3.0_unigene77399 SustainPine v3.0 393
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.078e-21
C-terminus
sp_v3.0_unigene77406 SustainPine v3.0 160
• AutoFact: Chloroplast light-harvesting complex II protein Lhcbm3 n=1 Tax=Bigelowiella natans RepID=Q9LE97_BIGNA 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 5.957e-16
Internal
sp_v3.0_unigene77813 SustainPine v3.0 292
• AutoFact: Similar to DNAJ proteins [Arabidopsis thaliana] 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperone protein DNAj, putative 6.789e-13
Internal
sp_v3.0_unigene78605 SustainPine v3.0 254
• AutoFact: Type III chlorophyll a /b-binding protein n=2 Tax=Pinaceae RepID=Q02071_PINSY 1.0e-09
• FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Type III chlorophyll a /b-binding protein 6.823e-06
Internal
sp_v3.0_unigene78905 SustainPine v3.0 196
• AutoFact: Type 1 light-harvesting chlorophyll a/b-binding polypeptide (Fragment) n=1 Tax=Pinus palustris RepID=Q40957_PINPA 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.881e-21
Putative C-terminus
sp_v3.0_unigene79067 SustainPine v3.0 414
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.917e-16
C-terminus
sp_v3.0_unigene79943 SustainPine v3.0 135
• AutoFact: Major light-harvesting chlorophyll a/b protein 3 n=1 Tax=Dunaliella salina RepID=A8BDJ0_DUNSA 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll a-b binding protein of LHCII type I, chloroplastic 4.078e-15
Internal
sp_v3.0_unigene79949 SustainPine v3.0 308
• AutoFact: Early light inducible protein n=3 Tax=Trifolieae RepID=A5HB53_MEDFA 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Early light inducible protein 2.158e-14
Internal
sp_v3.0_unigene80127 SustainPine v3.0 217
• AutoFact: Chloroplast light-harvesting protein CP29 Lhcb4 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ4_ACEAT 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll A/B binding protein, putative 4.59e-09
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain