Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chlorophyll A-B binding protein, plant

Term: IPR001344  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene37001 SustainPine v3.0 344
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Early light-induced protein 6.378e-19
C-terminus
sp_v3.0_unigene51320 SustainPine v3.0 453
• AutoFact: BZIP transcription factor family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q245S7_TETTH 2.0e-14
• FL-Next: Isoform 2 of Transcription factor HY5-like OS=Arabidopsis thaliana GN=HYH 0.0
• Sma3: Protein SIS1, putative 5.087e-09
Putative Complete
sp_v3.0_unigene51402 SustainPine v3.0 476
• AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=2 Tax=core eudicotyledons RepID=CB24_SOLLC 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 5.572e-24
C-terminus
sp_v3.0_unigene51414 SustainPine v3.0 628
• AutoFact: Chloroplast chlorophyll A-B binding protein n=1 Tax=Gossypium hirsutum RepID=C1K5D1_GOSHI 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Light-harvesting chlorophyll-a/b binding protein Lhcb4 1.208e-08
C-terminus
sp_v3.0_unigene51416 SustainPine v3.0 615
• AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll a/b-binding protein 9.073e-13
C-terminus
sp_v3.0_unigene51560 SustainPine v3.0 326
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-10
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Chlorophyll a-b binding protein of LHCII 1.762e-10
Putative N-terminus
sp_v3.0_unigene51951 SustainPine v3.0 344
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 4.147e-31
Internal
sp_v3.0_unigene52111 SustainPine v3.0 453
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.639e-33
N-terminus
sp_v3.0_unigene53153 SustainPine v3.0 155
• AutoFact: LHC I type II chlorophyll binding protein (Fragment) n=1 Tax=Pinus sylvestris RepID=Q8RU80_PINSY 4.0e-17
• FL-Next: tr=Type II chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Chlorophyll A/B binding protein, putative 6.129e-17
Internal
sp_v3.0_unigene53483 SustainPine v3.0 414
• AutoFact: light-harvesting chlorophyll-a/b binding protein LhcbM2a [Chlamydomonas incerta] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 0.0
Putative Complete
sp_v3.0_unigene53519 SustainPine v3.0 456
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 6.075e-29
Internal
sp_v3.0_unigene53724 SustainPine v3.0 396
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-27
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1B, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 2.564e-25
Internal
sp_v3.0_unigene54158 SustainPine v3.0 392
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.444e-14
N-terminus
sp_v3.0_unigene54346 SustainPine v3.0 451
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 7.882e-20
Putative Complete
sp_v3.0_unigene54666 SustainPine v3.0 160
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll a/b-binding protein 1.166e-07
Putative N-terminus
sp_v3.0_unigene54909 SustainPine v3.0 379
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.01e-16
C-terminus
sp_v3.0_unigene55028 SustainPine v3.0 497
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.883e-29
C-terminus
sp_v3.0_unigene55390 SustainPine v3.0 386
• AutoFact: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Homo sapiens] sp|P53597.4|SUCA_HUMAN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alp 2.0e-29
• FL-Next: sp=Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene55552 SustainPine v3.0 392
• AutoFact: Chloroplast photosystem II-associated 22 kDa protein n=2 Tax=Chlamydomonas reinhardtii RepID=A8HPM2_CHLRE 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast photosystem II 22 kDa PsbS protein psbS 2.993e-10
C-terminus
sp_v3.0_unigene55655 SustainPine v3.0 350
• AutoFact: LI818r-1 protein n=1 Tax=Chlamydomonas reinhardtii RepID=P93664_CHLRE 1.0e-15
• FL-Next: sp=Chlorophyll a-b binding protein L1818, chloroplastic; Chlamydomonas moewusii (Chlamydomonas eugametos). 0.0
• Sma3: LI818r-1 protein 9.88e-10
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain