Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chlorophyll A-B binding protein, plant

Term: IPR001344  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene18459 SustainPine v3.0 854
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ELIP 2.23e-21
Complete
sp_v3.0_unigene20454 SustainPine v3.0 1077
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast photosystem II 22 kDa PsbS protein psbS 2.594e-09
Putative Complete
sp_v3.0_unigene20857 SustainPine v3.0 662
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast photosystem II 22 kDa PsbS protein psbS 2.594e-09
N-terminus
sp_v3.0_unigene21228 SustainPine v3.0 845
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ELIP 2.23e-21
Complete
sp_v3.0_unigene21382 SustainPine v3.0 983
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 5.593e-32
Complete
sp_v3.0_unigene21573 SustainPine v3.0 1325
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.201e-28
Complete
sp_v3.0_unigene22121 SustainPine v3.0 1184
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Chlorophyll a/b-binding protein 0.0
Complete
sp_v3.0_unigene22131 SustainPine v3.0 317
• AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 9.0e-15
• FL-Next: tr=Type II chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
N-terminus
sp_v3.0_unigene26037 SustainPine v3.0 1230
• AutoFact: Type III chlorophyll a /b-binding protein n=2 Tax=Pinaceae RepID=Q02071_PINSY 0.0
• FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Putative Complete
sp_v3.0_unigene27321 SustainPine v3.0 454
• AutoFact: DnaJ like protein [Solanum lycopersicum] 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein SIS1, putative 2.852e-12
N-terminus
sp_v3.0_unigene29691 SustainPine v3.0 1273
• AutoFact: Type 1 chlorophyll a /b-binding protein n=1 Tax=Pinus sylvestris RepID=Q02069_PINSY 0.0
• FL-Next: tr=Type 1 chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Type 1 chlorophyll a /b-binding protein 0.0
Complete
sp_v3.0_unigene30147 SustainPine v3.0 1029
• AutoFact: Type 1 chlorophyll a /b-binding protein n=1 Tax=Pinus sylvestris RepID=Q02069_PINSY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30717 SustainPine v3.0 866
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ELIP 1.952e-21
Complete
sp_v3.0_unigene31231 SustainPine v3.0 901
• AutoFact: Early light-inducible protein n=3 Tax=Populus trichocarpa RepID=A9PHM1_POPTR 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Early light-induced protein 1.556e-22
Complete
sp_v3.0_unigene33050 SustainPine v3.0 573
• AutoFact: chlorophyll a/b-binding protein [Pinus thunbergii] 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.205e-18
Internal
sp_v3.0_unigene34159 SustainPine v3.0 1053
• AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 3.07e-33
Complete
sp_v3.0_unigene34658 SustainPine v3.0 1487
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Chlorophyll a/b-binding protein 0.0
Misassembled
sp_v3.0_unigene34834 SustainPine v3.0 954
• AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 0.0
• FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 1.747e-20
N-terminus
sp_v3.0_unigene35822 SustainPine v3.0 447
• AutoFact: Major light-harvesting chlorophyll a/b protein 3 n=1 Tax=Dunaliella salina RepID=A8BDJ0_DUNSA 2.0e-28
• FL-Next: tr=Light harvesting chlorophyll a /b-binding protein Lhcb1*1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: LHCP 5.87985e-42
C-terminus
sp_v3.0_unigene36452 SustainPine v3.0 548
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=5 Tax=Brassicaceae RepID=PSBS_ARATH 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II 22 kDa protein, chloroplastic 3.412e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain