Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chlorophyll A-B binding protein, plant

Term: IPR001344  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene155453 SustainPine v3.0 470
AutoFact: Succinate-CoA ligase n=1 Tax=Dictyostelium fasciculatum RepID=F4Q8R4_9MYCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Succinyl-CoA-ligase alpha subunit 9.882e-11
Internal
sp_v3.0_unigene155529 SustainPine v3.0 276
AutoFact: Light-harvesting chlorophyll-a/b protein of photosystem I n=3 Tax=Chlamydomonadales RepID=Q75VY8_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Light-harvesting chlorophyll-a/b protein of photosystem I 3.272e-14
Internal
sp_v3.0_unigene155581 SustainPine v3.0 453
AutoFact: Chloroplast light-harvesting complex I protein Lhca9 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ7_ACEAT 5.0e-39
FL-Next: tr=Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I; Pinus sylvestris (Scots pine). 0.0
Sma3: Chloroplast light-harvesting complex I protein Lhca9 9.259e-13
Internal
sp_v3.0_unigene156014 SustainPine v3.0 373
AutoFact: Succinate-CoA ligase n=1 Tax=Dictyostelium fasciculatum RepID=F4Q8R4_9MYCE 4.0e-18
FL-Next: sp=Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
C-terminus
sp_v3.0_unigene156560 SustainPine v3.0 414
AutoFact: Chlorophyll a-b binding protein type 1 member F3, chloroplastic n=2 Tax=Polypodiales RepID=CB23_POLMU 0.0
FL-Next: tr=Light-harvesting chlorophyll a/b-binding protein of photosystem II; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: LHCP 3.607e-29
Putative C-terminus
sp_v3.0_unigene156597 SustainPine v3.0 518
AutoFact: Ligase succinate-coa ligase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0K7_PHATC 1.0e-39
FL-Next: sp=Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Succinyl-CoA-ligase alpha subunit 8.734e-11
C-terminus
sp_v3.0_unigene156664 SustainPine v3.0 194
AutoFact: Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial n=8 Tax=Poaceae RepID=SUCA_ORYSJ 3.0e-19
FL-Next: sp=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene156739 SustainPine v3.0 383
AutoFact: Major light-harvesting complex II protein m10 n=1 Tax=Chlamydomonas reinhardtii RepID=Q8S3U0_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.805e-21
Putative N-terminus
sp_v3.0_unigene157163 SustainPine v3.0 188
AutoFact: DnaJ-like subfamily B member 6 n=2 Tax=Percomorpha RepID=Q3HS39_PAROL 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SIS1, putative 5.202e-11
Internal
sp_v3.0_unigene157302 SustainPine v3.0 242
AutoFact: Light-harvesting protein of photosystem I n=4 Tax=Chlamydomonadales RepID=D8UIW8_VOLCA 2.0e-16
FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 7.021e-25
C-terminus
sp_v3.0_unigene157714 SustainPine v3.0 322
AutoFact: Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial n=2 Tax=Solanum lycopersicum RepID=SUCA2_SOLLC 3.0e-15
FL-Next: sp=Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
C-terminus
sp_v3.0_unigene157948 SustainPine v3.0 523
AutoFact: Succinate-CoA ligase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C8K7_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Succinyl-CoA-ligase alpha subunit 9.528e-11
Internal
sp_v3.0_unigene158727 SustainPine v3.0 282
AutoFact: Heat shock protein DnaJ n=1 Tax=Medicago truncatula RepID=A2Q503_MEDTR 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DnaJ-like protein 3.397e-13
Putative N-terminus
sp_v3.0_unigene158943 SustainPine v3.0 263
AutoFact: Succinyl-CoA ligase n=2 Tax=Chlamydomonadales RepID=A8IWJ8_CHLRE 8.0e-27
FL-Next: sp=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene166794 SustainPine v3.0 320
AutoFact: Putative early light induced protein 2 n=1 Tax=Camellia sinensis RepID=C9E439_CAMSI 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Early light-induced protein 9.902e-12
C-terminus
sp_v3.0_unigene188236 SustainPine v3.0 647
AutoFact: Photosystem II 22 kDa protein, chloroplastic n=5 Tax=Brassicaceae RepID=PSBS_ARATH 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II 22 kDa protein, chloroplastic 3.485e-16
C-terminus
sp_v3.0_unigene193061 SustainPine v3.0 965
AutoFact: Light-harvesting chlorophyll-a/b binding protein LhcbM4 n=2 Tax=Scenedesmus obliquus RepID=A2SY35_SCEOB 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Light-harvesting chlorophyll-a/b binding protein LhcbM4 0.0
C-terminus
sp_v3.0_unigene200183 SustainPine v3.0 267
AutoFact: LI818r-1 protein n=1 Tax=Chlamydomonas reinhardtii RepID=P93664_CHLRE 3.0e-18
FL-Next: sp=Chlorophyll a-b binding protein L1818, chloroplastic; Chlamydomonas moewusii (Chlamydomonas eugametos). 0.0
Sma3: LI818r-1 protein 4.494e-10
Internal
sp_v3.0_unigene201963 SustainPine v3.0 823
AutoFact: Early light-inducible protein n=3 Tax=Populus trichocarpa RepID=A9PHM1_POPTR 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Early light-induced protein 1.961e-22
Complete
sp_v3.0_unigene202182 SustainPine v3.0 850
AutoFact: Phosphatidylcholine transfer protein, putative n=1 Tax=Ricinus communis RepID=B9RYW5_RICCO 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type III chlorophyll a/b-binding protein 5.009e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain