Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159955 SustainPine v3.0 443
• AutoFact: Putative MADS domain transcription factor GGM5 (Fragment) n=1 Tax=Gnetum gnemon RepID=Q9XGK2_GNEGN 2.0e-20
• FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Putative MADS domain transcription factor GGM5 5.848e-06
C-terminus
sp_v3.0_unigene160265 SustainPine v3.0 317
• AutoFact: MADS-box protein AGL2 subfamily n=1 Tax=Coffea arabica RepID=E9JPX4_COFAR 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leafy hull sterile 1 5.918e-18
Internal
sp_v3.0_unigene160607 SustainPine v3.0 490
• AutoFact: putative MADS box protein [Musa acuminata] 8.0e-13
• FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
• Sma3: MADS-box protein 2.683e-22
Complete
sp_v3.0_unigene161500 SustainPine v3.0 398
• AutoFact: Putative MADS domain transcription factor GGM3 n=1 Tax=Gnetum gnemon RepID=Q9XGK4_GNEGN 3.0e-34
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 1.643e-33
N-terminus
sp_v3.0_unigene162114 SustainPine v3.0 338
• AutoFact: Ser/Thr protein kinase isolog [Arabidopsis thaliana] 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 3.0e-15
Internal
sp_v3.0_unigene163523 SustainPine v3.0 244
• AutoFact: putative MADS domain transcription factor GGM9 [Gnetum gnemon] 3.0e-23
• FL-Next: tr=Dal1 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: MADS box protein 4.909e-28
Putative N-terminus
sp_v3.0_unigene164544 SustainPine v3.0 313
• AutoFact: Mads box protein, putative n=1 Tax=Ricinus communis RepID=B9RX62_RICCO 3.0e-20
• FL-Next: tr=Dal1 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene164860 SustainPine v3.0 336
• AutoFact: MADS-box protein CMB1 n=1 Tax=Dianthus caryophyllus RepID=CMB1_DIACA 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 2.335e-21
Putative N-terminus
sp_v3.0_unigene165819 SustainPine v3.0 400
• AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type I MADS-box transcription factor 4.873e-06
N-terminus
sp_v3.0_unigene166266 SustainPine v3.0 458
• AutoFact: MADS-box transcription factor 50 n=2 Tax=Oryza sativa Japonica Group RepID=MAD50_ORYSJ 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene166743 SustainPine v3.0 258
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SU72_RICCO 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 2.846e-10
N-terminus
sp_v3.0_unigene166835 SustainPine v3.0 302
• AutoFact: Isoform 2 of MADS-box transcription factor 13 n=1 Tax=Oryza sativa Japonica Group RepID=Q2QW53-2 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box transcription factor 1.935e-10
N-terminus
sp_v3.0_unigene167011 SustainPine v3.0 353
• AutoFact: MADS-box protein 5 [Solanum lycopersicum] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 1.244e-13
N-terminus
sp_v3.0_unigene167888 SustainPine v3.0 283
• AutoFact: MIKCC MADS-domain protein PPMC6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDM3_PHYPA 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box transcription factor 1.594e-09
N-terminus
sp_v3.0_unigene167988 SustainPine v3.0 253
• AutoFact: receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] dbj|BAD25902.1| receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 1.366e-14
Internal
sp_v3.0_unigene167991 SustainPine v3.0 177
• AutoFact: MADS-box protein AGL3-a [Brassica oleracea var. botrytis] 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168326 SustainPine v3.0 220
• AutoFact: protein AGAMOUS-like 65 [Arabidopsis thaliana] gb|AAN37407.1| MADS-box protein AGL65 [Arabidopsis thaliana] gb|AEE29758.1| protein AGAMOUS-like 65 [Arabidopsis thaliana] 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Mads box protein, putative 7.401e-07
Internal
sp_v3.0_unigene183403 SustainPine v3.0 540
• AutoFact: Putative MADS domain transcription factor GGM12 (Fragment) n=1 Tax=Gnetum gnemon RepID=Q9XGJ5_GNEGN 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene184414 SustainPine v3.0 919
• AutoFact: Truncated MADS-box transcription factor (Fragment) n=3 Tax=Pinaceae RepID=C6F9J9_PSEMZ 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 1.358e-23
Complete
sp_v3.0_unigene187556 SustainPine v3.0 476
• AutoFact: putative transcription factor [Cucumis sativus] 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain