Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene126172 SustainPine v3.0 1184
• AutoFact: MADS box protein n=6 Tax=Cucurbitaceae RepID=C5IS80_CUCSA 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene127216 SustainPine v3.0 1047
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Putative MADS box transcription factor PrMADS6 0.0
Complete
sp_v3.0_unigene127461 SustainPine v3.0 957
• AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene128576 SustainPine v3.0 815
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS8; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 8.892e-24
Putative Complete
sp_v3.0_unigene129557 SustainPine v3.0 976
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 2.167e-20
Complete
sp_v3.0_unigene130342 SustainPine v3.0 705
• AutoFact: Putative MADS box transcription factor PrMADS4 n=1 Tax=Pinus radiata RepID=O24488_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS4; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 5.612e-26
Putative N-terminus
sp_v3.0_unigene133602 SustainPine v3.0 460
• AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene136260 SustainPine v3.0 409
• AutoFact: SMI1_KNR4 domain containing protein 0.0001
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene137685 SustainPine v3.0 382
• AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene143175 SustainPine v3.0 827
• AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
• FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene143784 SustainPine v3.0 645
• AutoFact: UDP-galactose transporter-like protein [Arabidopsis thaliana] emb|CAB80251.1| UDP-galactose transporter-like protein [Arabidopsis thaliana] 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143913 SustainPine v3.0 741
• AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
• FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Zeatin O-glucosyltransferase 5.379e-09
C-terminus
sp_v3.0_unigene143951 SustainPine v3.0 471
• AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 2.0e-18
• FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Internal
sp_v3.0_unigene150375 SustainPine v3.0 387
• AutoFact: ABC transporter n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HXJ0_AZOC5 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene153184 SustainPine v3.0 490
• AutoFact: Multidrug resistance protein 1, 2, 3 (P glycoprotein 1, 2, 3) n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1CVJ9_NEOFI 6.0e-31
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene156110 SustainPine v3.0 235
• AutoFact: RAB GTPase-like protein C2B [Arabidopsis thaliana] ref|NP_001189850.1| RAB GTPase-like protein C2B [Arabidopsis thaliana] ref|NP_001189851.1| RAB GTPase-like protein C2B [Arabidopsis thaliana] sp|Q9SF92.1|RAC2B_ARATH RecName: Full=Ras-related protein RABC 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab18/RabC-family small GTPase 2.68e-20
Internal
sp_v3.0_unigene158432 SustainPine v3.0 186
• AutoFact: ABC transporter, ATP-binding/permease protein n=3 Tax=Rhodobacteraceae RepID=A9F879_9RHOB 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter-like protein 1.16e-09
Internal
sp_v3.0_unigene158806 SustainPine v3.0 270
• AutoFact: ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans BC RepID=E8TY52_ALIDB 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MDR-like ABC transporter 9.529e-28
Internal
sp_v3.0_unigene159283 SustainPine v3.0 115
• AutoFact: MADS-box transcription factor FBP4 [Petunia x hybrida] 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159865 SustainPine v3.0 302
• AutoFact: MADS-box transcription factor SrMADS1 (Fragment) n=1 Tax=Selaginella remotifolia RepID=Q84UJ6_SELRE 3.0e-08
• FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain