Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19205 SustainPine v3.0 163
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene19228 SustainPine v3.0 342
AutoFact: Ser/Thr protein kinase isolog [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene20156 SustainPine v3.0 310
AutoFact: Unassigned protein 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene20634 SustainPine v3.0 1122
AutoFact: Cmp-sialic acid transporter, putative n=1 Tax=Ricinus communis RepID=B9T341_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21072 SustainPine v3.0 877
AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: PISTILLATA-like protein 7.618e-26
Complete
sp_v3.0_unigene21950 SustainPine v3.0 883
AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|O04086.1|Y1105_ARATH RecName: Full=Probable receptor-like protein kinase At1g11050; Flags: Precursor gb|AAB65477.1| Ser/Thr protein kinase isolog; 46094-44217 [Arabidopsis thaliana] gb|AEE286 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 9.239e-17
C-terminus
sp_v3.0_unigene22056 SustainPine v3.0 1349
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RV84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 2.664e-11
Putative C-terminus
sp_v3.0_unigene22249 SustainPine v3.0 636
AutoFact: Putative receptor protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=Q8S3P8_ORYSJ 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr1 scaffold_135, whole genome shotgun sequence 1.114e-06
Putative Complete
sp_v3.0_unigene22977 SustainPine v3.0 454
AutoFact: Unassigned protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene24073 SustainPine v3.0 773
AutoFact: Mads box protein, putative n=1 Tax=Ricinus communis RepID=B9SMY1_RICCO 1.0e-23
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Sma3: AGAMOUS-like protein 3.474e-21
N-terminus
sp_v3.0_unigene24196 SustainPine v3.0 1258
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 0.0
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 9.12e-31
Complete
sp_v3.0_unigene24733 SustainPine v3.0 899
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MPF2-like 4.219e-15
C-terminus
sp_v3.0_unigene24825 SustainPine v3.0 487
AutoFact: MADS-box transcription factor GbMADS1 n=1 Tax=Ginkgo biloba RepID=Q58A82_GINBI 1.0e-37
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box protein 5.248e-21
N-terminus
sp_v3.0_unigene25535 SustainPine v3.0 1222
AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 0.0
FL-Next: tr=MADS-box transcription factor; Cycas edentata. 0.0
Sma3: AGAMOUS-like protein 0.0
Complete
sp_v3.0_unigene25572 SustainPine v3.0 555
AutoFact: MADS-box transcription factor TaAGL28 n=9 Tax=Pooideae RepID=Q1G180_WHEAT 1.0e-24
FL-Next: tr=Dal1 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS-box transcription factor 2.644e-17
N-terminus
sp_v3.0_unigene26105 SustainPine v3.0 683
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene26344 SustainPine v3.0 1295
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 5.60519e-45
FL-Next: tr=Putative MADS domain transcription factor GGM10; Gnetum gnemon (Bago) (Gnetum acutatum). 0.0
Sma3: MADS-box transcription factor 1.008e-23
Complete
sp_v3.0_unigene27927 SustainPine v3.0 616
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 4.06377e-44
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 3.585e-28
N-terminus
sp_v3.0_unigene27933 SustainPine v3.0 548
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene30565 SustainPine v3.0 1019
AutoFact: putative MADS-domain transcription factor DEFH7 [Antirrhinum majus] 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain