Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12131 SustainPine v3.0 1458
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box protein 0.0
Complete
sp_v3.0_unigene12228 SustainPine v3.0 1314
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AGAMOUS-like protein 4.151e-19
Putative Complete
sp_v3.0_unigene12306 SustainPine v3.0 1178
AutoFact: MADS-box transcription factor GbMADS9 n=1 Tax=Ginkgo biloba RepID=Q58A74_GINBI 0.0
FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: PISTILLATA-like protein 4.414e-11
Complete
sp_v3.0_unigene12641 SustainPine v3.0 1026
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12747 SustainPine v3.0 1041
AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
N-terminus
sp_v3.0_unigene12893 SustainPine v3.0 1181
AutoFact: MADS-box transcription factor 18 n=4 Tax=Oryza sativa RepID=MAD18_ORYSJ 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13475 SustainPine v3.0 779
AutoFact: putative MADS-box family transcription factor [Pinus radiata] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene14928 SustainPine v3.0 314
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 1.159e-27
Internal
sp_v3.0_unigene15030 SustainPine v3.0 545
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MPF2-like 2.966e-11
N-terminus
sp_v3.0_unigene15431 SustainPine v3.0 316
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 5.0e-26
FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: B-sister lineage-like protein BS 4.916e-10
C-terminus
sp_v3.0_unigene15589 SustainPine v3.0 1022
AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|O04086.1|Y1105_ARATH RecName: Full=Probable receptor-like protein kinase At1g11050; Flags: Precursor gb|AAB65477.1| Ser/Thr protein kinase isolog; 46094-44217 [Arabidopsis thaliana] gb|AEE286 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 3.036e-13
Complete
sp_v3.0_unigene15689 SustainPine v3.0 1100
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: DEF/GLO-like protein 0.0
Complete
sp_v3.0_unigene16410 SustainPine v3.0 379
AutoFact: serine/threonine protein kinase isolog [Arabidopsis thaliana] gb|AAO30076.1| serine/threonine protein kinase isolog [Arabidopsis thaliana] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene16414 SustainPine v3.0 595
AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 4.585e-15
N-terminus
sp_v3.0_unigene16509 SustainPine v3.0 890
AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SEE0_PICAB 0.0
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS-box transcription factor 0.0
Putative Complete
sp_v3.0_unigene16654 SustainPine v3.0 1055
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box transcription factor 8.35e-22
Complete
sp_v3.0_unigene17933 SustainPine v3.0 1187
AutoFact: Putative MADS-domain transcription factor GGM19 (Fragment) n=1 Tax=Gnetum gnemon RepID=Q9FST4_GNEGN 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene17959 SustainPine v3.0 1006
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box transcription factor 1.86e-21
Complete
sp_v3.0_unigene18219 SustainPine v3.0 1723
AutoFact: MADS-box protein n=7 Tax=Pinaceae RepID=A0S6W4_9CONI 0.0
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Sma3: MADS box transcription factor 0.0
Complete
sp_v3.0_unigene19047 SustainPine v3.0 646
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Fruitful-like MADS-box transcription factor 5.361e-25
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain