Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L24e-related

Term: IPR000988  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene93995 SustainPine v3.0 1220
• AutoFact: DUF868 domain containing protein 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene95330 SustainPine v3.0 455
• AutoFact: NAM [Petunia x hybrida] emb|CAA63102.2| NAM [Petunia x hybrida] 0.0
• FL-Next: tr=Cup-shaped cotyledon; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: NAC domain protein, IPR003441 1.1911e-43
N-terminus
sp_v3.0_unigene96305 SustainPine v3.0 634
• AutoFact: phosphoglycerate/bisphosphoglycerate mutase family protein [Arabidopsis thaliana] ref|NP_001154730.1| phosphoglycerate/bisphosphoglycerate mutase family protein [Arabidopsis thaliana] dbj|BAB11668.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Phosphoglycerate mutase family, putative 1.318e-09
Internal
sp_v3.0_unigene97724 SustainPine v3.0 243
• AutoFact: DUF868 domain containing protein 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene100715 SustainPine v3.0 573
• AutoFact: DUF868 domain containing protein 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene105803 SustainPine v3.0 559
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SNL1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Putative Complete
sp_v3.0_unigene126681 SustainPine v3.0 1437
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene126789 SustainPine v3.0 1066
• AutoFact: RecName: Full=60S ribosomal protein L24 emb|CAA12358.1| ribosomal protein L24 [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene145172 SustainPine v3.0 597
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene149457 SustainPine v3.0 365
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene150717 SustainPine v3.0 399
• AutoFact: 60S ribosomal protein L24 n=3 Tax=Otophysi RepID=RL24_DANRE 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 3.399e-18
N-terminus
sp_v3.0_unigene151339 SustainPine v3.0 315
• AutoFact: ribosomal protein L24 [Anopheles funestus] 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 2.268e-18
Internal
sp_v3.0_unigene153799 SustainPine v3.0 356
• AutoFact: Ribosomal protein L24-like protein n=1 Tax=Polysphondylium pallidum RepID=D3BSM2_POLPA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene154682 SustainPine v3.0 521
• AutoFact: 60S ribosomal protein L24 (Fragment) n=1 Tax=Karlodinium veneficum RepID=E8Z730_9DINO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene155023 SustainPine v3.0 349
• AutoFact: Ribosomal protein L24-like protein n=1 Tax=Polysphondylium pallidum RepID=D3BSM2_POLPA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene155122 SustainPine v3.0 442
• AutoFact: PREDICTED: 60S ribosomal protein L24-like n=1 Tax=Pan troglodytes RepID=UPI0000E20F84 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene155795 SustainPine v3.0 480
• AutoFact: ribosomal protein L24 [Xenopus laevis] gb|AAH78474.1| MGC85232 protein [Xenopus laevis] 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 1.911e-18
N-terminus
sp_v3.0_unigene158804 SustainPine v3.0 384
• AutoFact: ribosomal protein L24e [Babesia bovis T2Bo] gb|EDO07921.1| ribosomal protein L24e, putative [Babesia bovis] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164018 SustainPine v3.0 280
• AutoFact: [J] COG2075 Ribosomal protein L24E 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164207 SustainPine v3.0 250
• AutoFact: DUF868 domain containing protein 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain