Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L24e-related

Term: IPR000988  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene30332 SustainPine v3.0 1214
• AutoFact: RecName: Full=60S ribosomal protein L24 gb|AAG13986.1|AF298827_1 60S ribosomal protein L24 [Prunus avium] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 2.726e-07
Putative Complete
sp_v3.0_unigene30919 SustainPine v3.0 525
• AutoFact: ribosomal protein L35 [Hydra vulgaris] 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 3.399e-18
Complete
sp_v3.0_unigene31415 SustainPine v3.0 571
• AutoFact: 60S ribosomal protein L24 [Plasmodium berghei strain ANKA] emb|CAH99348.1| 60S ribosomal protein L24, putative [Plasmodium berghei] 3.0e-20
• FL-Next: tr=Predicted protein; Phaeodactylum tricornutum (strain CCAP 1055/1). 0.0
Complete
sp_v3.0_unigene32039 SustainPine v3.0 551
• AutoFact: 60S ribosomal protein L24 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SC69_VERA1 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene33108 SustainPine v3.0 986
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33209 SustainPine v3.0 720
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33373 SustainPine v3.0 606
• AutoFact: Ribosomal protein rpl24 n=1 Tax=Arenicola marina RepID=A8UFD3_AREMA 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene33683 SustainPine v3.0 622
• AutoFact: 60S ribosomal protein L24, putative n=2 Tax=fabids RepID=B9SRL5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 2.651e-07
N-terminus
sp_v3.0_unigene34602 SustainPine v3.0 1025
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34839 SustainPine v3.0 1208
• AutoFact: RecName: Full=60S ribosomal protein L24 emb|CAA12358.1| ribosomal protein L24 [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene36332 SustainPine v3.0 586
• AutoFact: RecName: Full=60S ribosomal protein L24 emb|CAA12358.1| ribosomal protein L24 [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 2.651e-07
Putative Complete
sp_v3.0_unigene38677 SustainPine v3.0 440
• AutoFact: DUF868 domain containing protein 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene48085 SustainPine v3.0 2721
• AutoFact: NAM [Petunia x hybrida] emb|CAA63102.2| NAM [Petunia x hybrida] 0.0
• FL-Next: tr=Cup-shaped cotyledon; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene66875 SustainPine v3.0 312
• AutoFact: Unassigned protein 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene74633 SustainPine v3.0 228
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene74999 SustainPine v3.0 338
• AutoFact: DUF868 domain containing protein 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75799 SustainPine v3.0 281
• AutoFact: 60S ribosomal protein L30-like protein n=6 Tax=Oryza sativa RepID=Q5QMX1_ORYSJ 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene75915 SustainPine v3.0 430
• AutoFact: 60S ribosomal protein L24, putative n=2 Tax=fabids RepID=B9SRL5_RICCO 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 1.653e-07
N-terminus
sp_v3.0_unigene79041 SustainPine v3.0 384
• AutoFact: DUF868 domain containing protein 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene79049 SustainPine v3.0 208
• AutoFact: RL30, ribosomal protein 30 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B8C0H2_THAPS 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain