Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCCH-type

Term: IPR000571  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3477 SustainPine v3.0 2892
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 37; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene3514 SustainPine v3.0 2902
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7W6_RICCO 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene3696 SustainPine v3.0 2482
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pumilio-family RNA binding repeat containing protein, expressed 1.994e-11
C-terminus
sp_v3.0_unigene3733 SustainPine v3.0 3627
AutoFact: endoribonuclease/protein kinase IRE1-like protein [Arabidopsis thaliana] gb|AAK15470.1|AF308596_1 endoribonuclease/protein kinase IRE1-like protein [Arabidopsis thaliana] dbj|BAB63367.1| Ire1 homolog-2 [Arabidopsis thaliana] gb|AAD32909.2| putative protei 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene3890 SustainPine v3.0 2993
AutoFact: cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis thaliana] sp|A9LNK9.1|CPSF_ARATH RecName: Full=Cleavage and polyadenylation specificity factor CPSF30; AltName: Full=Zinc finger CCCH domain-containing protein 11; Short=AtC3H11 gb|ABX260 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene4552 SustainPine v3.0 386
AutoFact: putative receptor protein kinase [Oryza sativa Japonica Group] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4689 SustainPine v3.0 1612
AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transposon protein, putative, Mutator sub-class, expressed 1.496e-12
C-terminus
sp_v3.0_unigene5284 SustainPine v3.0 2531
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5468 SustainPine v3.0 3217
AutoFact: zinc finger CCCH domain-containing protein 18 [Arabidopsis thaliana] sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18; Short=AtC3H18 gb|AAD29054.1| hypothetical protein [Arabidopsis thaliana] gb|AEC05899.1| zinc finger C 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene5563 SustainPine v3.0 2368
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pumilio-family RNA binding repeat containing protein, expressed 1.442e-11
C-terminus
sp_v3.0_unigene5674 SustainPine v3.0 1982
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5676 SustainPine v3.0 1881
AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein ZFN-like gb|AAD45720.1| zinc finger protein [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5747 SustainPine v3.0 5568
AutoFact: Phosphorylase n=1 Tax=Picea sitchensis RepID=A9NUV6_PICSI 0.0
FL-Next: sp=Phosphorylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphorylase 0.0
Complete
sp_v3.0_unigene6408 SustainPine v3.0 2537
AutoFact: zinc finger CCCH domain-containing protein 65 [Arabidopsis thaliana] sp|Q9LTS7.1|C3H65_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 65; Short=AtC3H65; AltName: Full=Protein EMBRYO DEFECTIVE 1789 dbj|BAA97023.1| unnamed protein product [A 8.0e-26
FL-Next: sp=Zinc finger CCCH domain-containing protein 65; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: OsC3H7 9.26e-06
Complete
sp_v3.0_unigene6511 SustainPine v3.0 2620
AutoFact: Phosphofructokinase, putative n=1 Tax=Ricinus communis RepID=B9RRX6_RICCO 0.0
FL-Next: sp=6-phosphofructokinase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphofructokinase, putative 3.151e-19
Complete
sp_v3.0_unigene6548 SustainPine v3.0 1430
AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photoreceptor-interacting protein-like 9.971e-16
C-terminus
sp_v3.0_unigene6549 SustainPine v3.0 2477
AutoFact: Mating_C domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zn-finger transcription factor 4.995e-15
Complete
sp_v3.0_unigene6681 SustainPine v3.0 1006
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6864 SustainPine v3.0 1179
AutoFact: Zinc finger CCCH domain-containing protein 20 n=2 Tax=Arabidopsis RepID=C3H20_ARATH 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zn-finger transcription factor 4.501e-15
Internal
sp_v3.0_unigene6979 SustainPine v3.0 1694
AutoFact: Glycosyltransferase, CAZy family GT8 n=3 Tax=Malpighiales RepID=B9H0E2_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycosyltransferase QUASIMODO1, putative 1.19e-27
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain