Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription factor IIS, N-terminal

Term: IPR017923  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1616 SustainPine v3.0 1556
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription elongation factor s-II, putative 2.822e-11
Complete
sp_v3.0_unigene1854 SustainPine v3.0 4888
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AAL36370.1| unknown protein [Arabidopsis thaliana] gb|AAM20286.1| unknown protein [Arabidopsis thaliana] gb|AEE84863.1| Transcription elongation factor (TFIIS) family protein 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3872 SustainPine v3.0 2414
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana] gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6244 SustainPine v3.0 2410
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6334 SustainPine v3.0 3350
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene10690 SustainPine v3.0 1777
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11958 SustainPine v3.0 2004
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AEE31438.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene23480 SustainPine v3.0 2218
AutoFact: protein trichome birefringence-like 24 [Arabidopsis thaliana] gb|AAN13062.1| unknown protein [Arabidopsis thaliana] gb|AEE84806.1| protein trichome birefringence-like 24 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leaf senescence protein-like 3.083e-09
Complete
sp_v3.0_unigene23627 SustainPine v3.0 1024
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30952 SustainPine v3.0 1656
AutoFact: protein trichome birefringence-like 25 [Arabidopsis thaliana] gb|AAO42299.1| unknown protein [Arabidopsis thaliana] gb|AAO64043.1| unknown protein [Arabidopsis thaliana] gb|AEE27285.1| protein trichome birefringence-like 25 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leaf senescence protein-like 3.051e-06
Complete
sp_v3.0_unigene34515 SustainPine v3.0 542
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 4.0e-28
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene35717 SustainPine v3.0 863
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AEE31438.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fiber protein Fb15 4.617e-09
N-terminus
sp_v3.0_unigene40212 SustainPine v3.0 2446
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana] gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene42024 SustainPine v3.0 148
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene63075 SustainPine v3.0 169
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene76193 SustainPine v3.0 345
AutoFact: Phosphoribulokinase, chloroplastic n=3 Tax=Chlamydomonadales RepID=KPPR_CHLRE 1.0e-10
FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoribulokinase 6.955e-23
C-terminus
sp_v3.0_unigene77150 SustainPine v3.0 174
AutoFact: Phosphoribulokinase (Fragment) n=1 Tax=Picea abies RepID=Q3ZDJ0_PICAB 1.0e-14
FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoribulokinase 1.089e-39
Putative C-terminus
sp_v3.0_unigene77942 SustainPine v3.0 203
AutoFact: Phosphoribulokinase, chloroplastic n=1 Tax=Spinacia oleracea RepID=KPPR_SPIOL 3.0e-25
FL-Next: sp=Phosphoribulokinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoribulokinase 0.0
Internal
sp_v3.0_unigene97748 SustainPine v3.0 602
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana] gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.0e-35
FL-Next: sp=Probable mediator of RNA polymerase II transcription subunit 26b; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene98526 SustainPine v3.0 456
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain