Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Glutamine synthetase, catalytic domain

Term: IPR008146  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene72854 SustainPine v3.0 285
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 8.0e-22
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.4013e-45
Internal
sp_v3.0_unigene73550 SustainPine v3.0 403
• AutoFact: Glutamine synthetase nodule isozyme n=2 Tax=Pisum sativum RepID=GLNA1_PEA 1.0e-24
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene73740 SustainPine v3.0 347
• AutoFact: Glutamine synthetase n=2 Tax=Tuber RepID=GLNA_TUBBO 5.00264e-43
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene76191 SustainPine v3.0 365
• AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.149e-32
N-terminus
sp_v3.0_unigene78086 SustainPine v3.0 327
• AutoFact: Glutamine synthetase n=1 Tax=Amanita muscaria RepID=GLNA_AMAMU 9.80909e-45
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
Putative C-terminus
sp_v3.0_unigene80383 SustainPine v3.0 202
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 9.0e-15
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
Misassembled
sp_v3.0_unigene80409 SustainPine v3.0 119
• AutoFact: Glutamine synthetase n=1 Tax=Amanita muscaria RepID=GLNA_AMAMU 6.0e-11
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: GS112 8.285e-06
Internal
sp_v3.0_unigene81602 SustainPine v3.0 128
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 8.0e-06
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene105915 SustainPine v3.0 453
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.17587e-43
N-terminus
sp_v3.0_unigene108338 SustainPine v3.0 494
• AutoFact: Glutamine synthetase n=1 Tax=Suillus bovinus RepID=GLNA_SUIBO 0.0
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene118666 SustainPine v3.0 345
• AutoFact: Glutamine synthetase n=2 Tax=Schizophyllum commune RepID=D8PPX2_SCHCM 0.0
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
N-terminus
sp_v3.0_unigene119922 SustainPine v3.0 388
• AutoFact: Glutamine synthetase n=2 Tax=Tuber RepID=GLNA_TUBBO 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene125116 SustainPine v3.0 437
• AutoFact: Polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8W153_ORYSJ 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.351e-18
Putative N-terminus
sp_v3.0_unigene127862 SustainPine v3.0 1188
• AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 0.0
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamate--ammonia ligase 0.0
C-terminus
sp_v3.0_unigene135008 SustainPine v3.0 357
• AutoFact: Unassigned protein 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00810; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.105e-12
C-terminus
sp_v3.0_unigene144502 SustainPine v3.0 878
• AutoFact: glutamine synthetase root isozyme 4 [Zea mays] sp|P38562.1|GLNA4_MAIZE RecName: Full=Glutamine synthetase root isozyme 4; AltName: Full=GS107; AltName: Full=Glutamate--ammonia ligase emb|CAA46722.1| glutamine synthetase [Zea mays] 7.0e-29
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Misassembled
sp_v3.0_unigene145356 SustainPine v3.0 268
• AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 2.0e-38
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Internal
sp_v3.0_unigene147656 SustainPine v3.0 999
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147659 SustainPine v3.0 706
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 1.0e-18
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147662 SustainPine v3.0 603
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain