Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene129852 SustainPine v3.0 245
• AutoFact: putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana] 9.0e-24
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
• Sma3: Putative formamidopyrimidine-DNA glycosylase 1 6.195e-09
Internal
sp_v3.0_unigene130905 SustainPine v3.0 318
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene130976 SustainPine v3.0 281
• AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S6F5_RICCO 8.0e-27
• FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
• Sma3: DNA-3-methyladenine glycosylase, putative 9.494e-08
Putative C-terminus
sp_v3.0_unigene131589 SustainPine v3.0 623
• AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
N-terminus
sp_v3.0_unigene132899 SustainPine v3.0 237
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 2.852e-08
Putative N-terminus
sp_v3.0_unigene133034 SustainPine v3.0 465
• AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 1.062e-24
Internal
sp_v3.0_unigene133528 SustainPine v3.0 328
• AutoFact: Unassigned protein 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene133695 SustainPine v3.0 603
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene134483 SustainPine v3.0 406
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 4.714e-08
Putative N-terminus
sp_v3.0_unigene136275 SustainPine v3.0 201
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ankyrin protein kinase-like 5.788e-15
Internal
sp_v3.0_unigene137249 SustainPine v3.0 249
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 1.117e-23
Internal
sp_v3.0_unigene137336 SustainPine v3.0 316
• AutoFact: putative methyltransferase PMT17 [Arabidopsis thaliana] sp|Q9SZX8.1|PMTH_ARATH RecName: Full=Probable methyltransferase PMT17 emb|CAB40037.1| putative protein [Arabidopsis thaliana] emb|CAB78167.1| putative protein [Arabidopsis thaliana] gb|AEE82883.1| pu 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.362e-20
Internal
sp_v3.0_unigene139689 SustainPine v3.0 358
• AutoFact: sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gb|AED95551.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] 5.0e-24
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Androgen induced inhibitor of proliferation (As3) / pds5, putative 7.581e-10
Internal
sp_v3.0_unigene140966 SustainPine v3.0 611
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 5.444e-21
N-terminus
sp_v3.0_unigene141318 SustainPine v3.0 736
• AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTA3_PHYPA 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Putative C-terminus
sp_v3.0_unigene141383 SustainPine v3.0 528
• AutoFact: Unassigned protein 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene142257 SustainPine v3.0 1178
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene142333 SustainPine v3.0 1592
• AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine endopeptidase degp2, putative 8.939e-20
Putative Complete
sp_v3.0_unigene143138 SustainPine v3.0 1186
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Putative Complete
sp_v3.0_unigene143319 SustainPine v3.0 762
• AutoFact: Variant of histone H1 n=1 Tax=Lilium longiflorum RepID=Q9ST40_LILLO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain