Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene114751 SustainPine v3.0 279
AutoFact: DUF296 domain containing protein 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 6.058e-26
Internal
sp_v3.0_unigene118365 SustainPine v3.0 210
AutoFact: [R] COG2940 Proteins containing SET domain 3.0e-18
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene118475 SustainPine v3.0 225
AutoFact: DUF296 domain containing protein 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 5.956e-17
Internal
sp_v3.0_unigene118628 SustainPine v3.0 624
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9SYY2_RICCO 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-associated protein MAP65-1a 3.625e-27
Putative C-terminus
sp_v3.0_unigene119152 SustainPine v3.0 273
AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 4.216e-29
Internal
sp_v3.0_unigene120572 SustainPine v3.0 284
AutoFact: Bromodomain n=1 Tax=Medicago truncatula RepID=Q1SKV9_MEDTR 1.0e-23
FL-Next: tr=Bromodomain; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Bromodomain-containing protein, putative 8.946e-08
Internal
sp_v3.0_unigene121609 SustainPine v3.0 356
AutoFact: AT hook motif-containing protein [Arabidopsis thaliana] gb|AAM83245.1| AT5g54930/MBG8_20 [Arabidopsis thaliana] gb|AAO42755.1| At5g54930/MBG8_20 [Arabidopsis thaliana] gb|AED96558.1| AT hook motif-containing protein [Arabidopsis thaliana] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene123429 SustainPine v3.0 236
AutoFact: Chloroplast DNA-binding protein PD3 n=1 Tax=Pisum sativum RepID=O04698_PEA 2.0e-13
FL-Next: tr=Chloroplast DNA-binding protein PD3; Pisum sativum (Garden pea). 0.0
Sma3: ENBP1 protein 2.61e-08
Internal
sp_v3.0_unigene125766 SustainPine v3.0 241
AutoFact: DNA ligase n=1 Tax=Populus nigra RepID=Q0PCF8_POPNI 1.0e-23
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 3.617e-10
Internal
sp_v3.0_unigene126819 SustainPine v3.0 1238
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene127008 SustainPine v3.0 1257
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene127388 SustainPine v3.0 1253
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene127456 SustainPine v3.0 794
AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
N-terminus
sp_v3.0_unigene127591 SustainPine v3.0 684
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
N-terminus
sp_v3.0_unigene127863 SustainPine v3.0 837
AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Putative Complete
sp_v3.0_unigene128632 SustainPine v3.0 279
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 1.0e-08
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene128989 SustainPine v3.0 434
AutoFact: HC2 multi-domain protein 8.0e-13
Sma3: Histone H1 6.02558e-44
coding
sp_v3.0_unigene129083 SustainPine v3.0 432
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9RXM3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 2.38221e-44
Putative C-terminus
sp_v3.0_unigene129403 SustainPine v3.0 325
AutoFact: putative MATE efflux family protein [Oryza sativa Japonica Group] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 4.90454e-44
Internal
sp_v3.0_unigene129549 SustainPine v3.0 371
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Androgen induced inhibitor of proliferation (As3) / pds5, putative 5.167e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain