Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene101584 SustainPine v3.0 760
• AutoFact: Transparent testa 12 protein n=1 Tax=Zea mays RepID=B6SV36_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
C-terminus
sp_v3.0_unigene102522 SustainPine v3.0 585
• AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9T6V3_RICCO 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 4.19689e-42
C-terminus
sp_v3.0_unigene102559 SustainPine v3.0 479
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Putative uncharacterized protein At3g07610 1.317e-08
Internal
sp_v3.0_unigene102773 SustainPine v3.0 562
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
• FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: SWI2/SNF2-like protein 1.397e-14
Internal
sp_v3.0_unigene102775 SustainPine v3.0 590
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene103111 SustainPine v3.0 513
• AutoFact: Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH 3.0e-27
• FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.103e-08
Internal
sp_v3.0_unigene103487 SustainPine v3.0 371
• AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9R8W9_RICCO 2.0e-17
• FL-Next: sp=Histone-lysine N-methyltransferase ASHR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene103573 SustainPine v3.0 749
• AutoFact: HhH-GPD domain containing protein 6.0e-16
• FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA glycosylase 2.265e-10
Internal
sp_v3.0_unigene103607 SustainPine v3.0 446
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
• Sma3: Putative uncharacterized protein OSJNBa0075N02.126 5.848e-06
Internal
sp_v3.0_unigene104491 SustainPine v3.0 491
• AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene104752 SustainPine v3.0 483
• AutoFact: SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] gb|AED91300.1| SWIB/MDM2 and Plus-3 and GYF domain-contai 3.0e-23
• FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105026 SustainPine v3.0 178
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105349 SustainPine v3.0 487
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 3.905e-08
Putative Complete
sp_v3.0_unigene106675 SustainPine v3.0 223
• AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-20
• FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 9.835e-09
Internal
sp_v3.0_unigene107342 SustainPine v3.0 639
• AutoFact: sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gb|AED95551.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Androgen induced inhibitor of proliferation (As3) / pds5, putative 8.408e-10
Internal
sp_v3.0_unigene108878 SustainPine v3.0 425
• AutoFact: sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gb|AED95551.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Androgen induced inhibitor of proliferation (As3) / pds5, putative 1.147e-09
Internal
sp_v3.0_unigene110889 SustainPine v3.0 348
• AutoFact: DNA helicase INO80 complex-like 1 n=1 Tax=Arabidopsis thaliana RepID=F4J277_ARATH 0.0
• FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromatin remodeling complex subunit 9.252e-19
Internal
sp_v3.0_unigene110901 SustainPine v3.0 449
• AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SHW2_RICCO 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene111174 SustainPine v3.0 572
• AutoFact: DNA binding protein n=1 Tax=Zea mays RepID=B6SJB5_MAIZE 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 4.919e-17
Putative N-terminus
sp_v3.0_unigene113724 SustainPine v3.0 190
• AutoFact: putative chromatin remodeling protein SYD [Arabidopsis thaliana] 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain