Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene79623 SustainPine v3.0 335
AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9SDZ0_RICCO 8.0e-06
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: ESC, putative 2.242e-15
Internal
sp_v3.0_unigene81497 SustainPine v3.0 90
AutoFact: PHD finger family protein [Arabidopsis thaliana] gb|AED93071.1| PHD finger family protein [Arabidopsis thaliana] 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene81638 SustainPine v3.0 142
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 3.0e-15
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 7.815e-10
Internal
sp_v3.0_unigene82081 SustainPine v3.0 515
AutoFact: histone H1/green fluorescent protein S65T variant fusion protein [Expression vector pMF280] 6.0e-14
Sma3: Histone H1 2.274e-21
coding
sp_v3.0_unigene84438 SustainPine v3.0 245
AutoFact: API5 domain containing protein 0.0001
coding
sp_v3.0_unigene86716 SustainPine v3.0 303
AutoFact: BASP1 multi-domain protein 4.0e-12
Sma3: Histone H1 4.623e-38
coding
sp_v3.0_unigene93612 SustainPine v3.0 1821
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 9.648e-28
Putative Complete
sp_v3.0_unigene93986 SustainPine v3.0 671
AutoFact: JmjC domain containing protein 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 4.756e-08
Putative Complete
sp_v3.0_unigene94024 SustainPine v3.0 3139
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9SYY2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-associated protein MAP65-1a 5.412e-27
Complete
sp_v3.0_unigene94233 SustainPine v3.0 468
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 7.717e-23
C-terminus
sp_v3.0_unigene95206 SustainPine v3.0 709
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AEE81864.1| mate efflux domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 3.65403e-41
C-terminus
sp_v3.0_unigene96880 SustainPine v3.0 478
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene98316 SustainPine v3.0 295
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 4.12e-08
Putative N-terminus
sp_v3.0_unigene98761 SustainPine v3.0 427
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein At3g07610 2.61e-08
Internal
sp_v3.0_unigene98953 SustainPine v3.0 741
AutoFact: JmjC domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 3.963e-08
Putative Complete
sp_v3.0_unigene99050 SustainPine v3.0 677
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9RHR0_RICCO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene99263 SustainPine v3.0 267
AutoFact: Unassigned protein 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene100116 SustainPine v3.0 628
AutoFact: putative MATE family protein [Oryza sativa Japonica Group] gb|EEE59381.1| hypothetical protein OsJ_11497 [Oryza sativa Japonica Group] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 9.80909e-45
C-terminus
sp_v3.0_unigene100322 SustainPine v3.0 424
AutoFact: microtubule-associated proteins 65-1 [Arabidopsis thaliana] sp|Q9FLP0.1|MA651_ARATH RecName: Full=65-kDa microtubule-associated protein 1; Short=AtMAP65-1 dbj|BAB08592.1| unnamed protein product [Arabidopsis thaliana] gb|AAO42887.1| At5g55230 [Arabidopsis 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-associated protein MAP65-1a 6.17e-21
Internal
sp_v3.0_unigene100475 SustainPine v3.0 465
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative microtubule-associated protein MAP65-1a 1.354e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain